Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPF1Q9NWY4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HPF1Q9NWY4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.05■□□□□ 0.8
HPF1Q9NWY4 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.05■□□□□ 0.8
HPF1Q9NWY4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.05■□□□□ 0.8
HPF1Q9NWY4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPF1Q9NWY4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HPF1Q9NWY4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.05■□□□□ 0.8
HPF1Q9NWY4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.05■□□□□ 0.8
HPF1Q9NWY4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPF1Q9NWY4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HPF1Q9NWY4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.05■□□□□ 0.8
HPF1Q9NWY4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 AC034268.1-201ENST00000441047 882 ntBASIC20.04■□□□□ 0.8
HPF1Q9NWY4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HPF1Q9NWY4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPF1Q9NWY4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPF1Q9NWY4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPF1Q9NWY4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.03■□□□□ 0.8
HPF1Q9NWY4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
HPF1Q9NWY4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.03■□□□□ 0.8
HPF1Q9NWY4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPF1Q9NWY4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HPF1Q9NWY4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HPF1Q9NWY4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPF1Q9NWY4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPF1Q9NWY4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPF1Q9NWY4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPF1Q9NWY4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.02■□□□□ 0.8
HPF1Q9NWY4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HPF1Q9NWY4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.02■□□□□ 0.8
HPF1Q9NWY4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.02■□□□□ 0.8
HPF1Q9NWY4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HPF1Q9NWY4 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.02■□□□□ 0.8
HPF1Q9NWY4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HPF1Q9NWY4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
HPF1Q9NWY4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
HPF1Q9NWY4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HPF1Q9NWY4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.02■□□□□ 0.79
HPF1Q9NWY4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HPF1Q9NWY4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPF1Q9NWY4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPF1Q9NWY4 LINC02228-203ENST00000641970 1355 ntBASIC20.01■□□□□ 0.79
HPF1Q9NWY4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPF1Q9NWY4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HPF1Q9NWY4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPF1Q9NWY4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.01■□□□□ 0.79
HPF1Q9NWY4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HPF1Q9NWY4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HPF1Q9NWY4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
HPF1Q9NWY4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPF1Q9NWY4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
HPF1Q9NWY4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HPF1Q9NWY4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20■□□□□ 0.79
HPF1Q9NWY4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20■□□□□ 0.79
HPF1Q9NWY4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HPF1Q9NWY4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HPF1Q9NWY4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HPF1Q9NWY4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HPF1Q9NWY4 AL162430.1-201ENST00000480705 870 ntBASIC20■□□□□ 0.79
HPF1Q9NWY4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20■□□□□ 0.79
HPF1Q9NWY4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20■□□□□ 0.79
HPF1Q9NWY4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20■□□□□ 0.79
HPF1Q9NWY4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
HPF1Q9NWY4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HPF1Q9NWY4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HPF1Q9NWY4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 AC104564.3-201ENST00000582367 638 ntBASIC19.99■□□□□ 0.79
HPF1Q9NWY4 SMUG1P1-201ENST00000590640 811 ntBASIC19.99■□□□□ 0.79
HPF1Q9NWY4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
HPF1Q9NWY4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms