Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCM2LQ9NUG4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 AC021242.3-201ENST00000607598 1377 ntBASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCM2LQ9NUG4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCM2LQ9NUG4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CCM2LQ9NUG4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.55■□□□□ 0.88
CCM2LQ9NUG4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.55■□□□□ 0.88
CCM2LQ9NUG4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.55■□□□□ 0.88
CCM2LQ9NUG4 AC005837.3-201ENST00000612163 286 ntBASIC20.55■□□□□ 0.88
CCM2LQ9NUG4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.55■□□□□ 0.88
CCM2LQ9NUG4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CCM2LQ9NUG4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCM2LQ9NUG4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCM2LQ9NUG4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.55■□□□□ 0.88
CCM2LQ9NUG4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.55■□□□□ 0.88
CCM2LQ9NUG4 AF131216.4-201ENST00000638924 1588 ntBASIC20.55■□□□□ 0.88
CCM2LQ9NUG4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.54■□□□□ 0.88
CCM2LQ9NUG4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCM2LQ9NUG4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CCM2LQ9NUG4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.54■□□□□ 0.88
CCM2LQ9NUG4 AC110285.6-201ENST00000617652 491 ntBASIC20.54■□□□□ 0.88
CCM2LQ9NUG4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCM2LQ9NUG4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCM2LQ9NUG4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCM2LQ9NUG4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 AC120024.1-201ENST00000562672 995 ntBASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 AC092028.1-203ENST00000608262 953 ntBASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCM2LQ9NUG4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.52■□□□□ 0.88
CCM2LQ9NUG4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2LQ9NUG4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2LQ9NUG4 LINC01960-201ENST00000563759 1884 ntBASIC20.52■□□□□ 0.88
CCM2LQ9NUG4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2LQ9NUG4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2LQ9NUG4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2LQ9NUG4 AL121603.2-201ENST00000557373 2117 ntBASIC20.52■□□□□ 0.88
CCM2LQ9NUG4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CCM2LQ9NUG4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CCM2LQ9NUG4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCM2LQ9NUG4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCM2LQ9NUG4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2LQ9NUG4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2LQ9NUG4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CCM2LQ9NUG4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2LQ9NUG4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2LQ9NUG4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CCM2LQ9NUG4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2LQ9NUG4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2LQ9NUG4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.51■□□□□ 0.87
CCM2LQ9NUG4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCM2LQ9NUG4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2LQ9NUG4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCM2LQ9NUG4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2LQ9NUG4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.5■□□□□ 0.87
CCM2LQ9NUG4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2LQ9NUG4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2LQ9NUG4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.5■□□□□ 0.87
CCM2LQ9NUG4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCM2LQ9NUG4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CCM2LQ9NUG4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.5■□□□□ 0.87
CCM2LQ9NUG4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.5■□□□□ 0.87
CCM2LQ9NUG4 AC096631.2-201ENST00000436136 790 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms