Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.5■■□□□ 1.83
ECHDC1Q9NTX5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.5■■□□□ 1.83
ECHDC1Q9NTX5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
ECHDC1Q9NTX5 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.5■■□□□ 1.83
ECHDC1Q9NTX5 AC105265.2-201ENST00000467189 838 ntBASIC26.5■■□□□ 1.83
ECHDC1Q9NTX5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
ECHDC1Q9NTX5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.5■■□□□ 1.83
ECHDC1Q9NTX5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ECHDC1Q9NTX5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ECHDC1Q9NTX5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ECHDC1Q9NTX5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.5■■□□□ 1.83
ECHDC1Q9NTX5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.5■■□□□ 1.83
ECHDC1Q9NTX5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
ECHDC1Q9NTX5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.49■■□□□ 1.83
ECHDC1Q9NTX5 OR7E47P-201ENST00000546390 1422 ntBASIC26.49■■□□□ 1.83
ECHDC1Q9NTX5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.49■■□□□ 1.83
ECHDC1Q9NTX5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.49■■□□□ 1.83
ECHDC1Q9NTX5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
ECHDC1Q9NTX5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
ECHDC1Q9NTX5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.49■■□□□ 1.83
ECHDC1Q9NTX5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ECHDC1Q9NTX5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
ECHDC1Q9NTX5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.48■■□□□ 1.83
ECHDC1Q9NTX5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ECHDC1Q9NTX5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
ECHDC1Q9NTX5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.48■■□□□ 1.83
ECHDC1Q9NTX5 MIR572-201ENST00000384983 95 ntBASIC26.48■■□□□ 1.83
ECHDC1Q9NTX5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ECHDC1Q9NTX5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
ECHDC1Q9NTX5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ECHDC1Q9NTX5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.47■■□□□ 1.83
ECHDC1Q9NTX5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ECHDC1Q9NTX5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.47■■□□□ 1.83
ECHDC1Q9NTX5 SMUG1P1-201ENST00000590640 811 ntBASIC26.47■■□□□ 1.83
ECHDC1Q9NTX5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ECHDC1Q9NTX5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 EP400NL-214ENST00000641289 2402 ntBASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.46■■□□□ 1.83
ECHDC1Q9NTX5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.83
ECHDC1Q9NTX5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
ECHDC1Q9NTX5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
ECHDC1Q9NTX5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
ECHDC1Q9NTX5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
ECHDC1Q9NTX5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
ECHDC1Q9NTX5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.83
ECHDC1Q9NTX5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
ECHDC1Q9NTX5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
ECHDC1Q9NTX5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
ECHDC1Q9NTX5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
ECHDC1Q9NTX5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.45■■□□□ 1.82
ECHDC1Q9NTX5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC26.45■■□□□ 1.82
ECHDC1Q9NTX5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.45■■□□□ 1.82
ECHDC1Q9NTX5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
ECHDC1Q9NTX5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
ECHDC1Q9NTX5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
ECHDC1Q9NTX5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.45■■□□□ 1.82
ECHDC1Q9NTX5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ECHDC1Q9NTX5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ECHDC1Q9NTX5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ECHDC1Q9NTX5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.44■■□□□ 1.82
ECHDC1Q9NTX5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ECHDC1Q9NTX5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
ECHDC1Q9NTX5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
ECHDC1Q9NTX5 AC092053.2-201ENST00000640557 1818 ntBASIC26.44■■□□□ 1.82
ECHDC1Q9NTX5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
ECHDC1Q9NTX5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
ECHDC1Q9NTX5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
ECHDC1Q9NTX5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
ECHDC1Q9NTX5 AC105233.4-201ENST00000642045 216 ntBASIC26.43■■□□□ 1.82
ECHDC1Q9NTX5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
ECHDC1Q9NTX5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
ECHDC1Q9NTX5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ECHDC1Q9NTX5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ECHDC1Q9NTX5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ECHDC1Q9NTX5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ECHDC1Q9NTX5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ECHDC1Q9NTX5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ECHDC1Q9NTX5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.42■■□□□ 1.82
ECHDC1Q9NTX5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ECHDC1Q9NTX5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ECHDC1Q9NTX5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ECHDC1Q9NTX5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
ECHDC1Q9NTX5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
ECHDC1Q9NTX5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
ECHDC1Q9NTX5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms