Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.18■■□□□ 1.3
CISHQ9NSE2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CISHQ9NSE2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CISHQ9NSE2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.18■■□□□ 1.3
CISHQ9NSE2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CISHQ9NSE2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.18■■□□□ 1.3
CISHQ9NSE2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.18■■□□□ 1.3
CISHQ9NSE2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CISHQ9NSE2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CISHQ9NSE2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CISHQ9NSE2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
CISHQ9NSE2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CISHQ9NSE2 AC105265.2-201ENST00000467189 838 ntBASIC23.17■■□□□ 1.3
CISHQ9NSE2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CISHQ9NSE2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.17■■□□□ 1.3
CISHQ9NSE2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.17■■□□□ 1.3
CISHQ9NSE2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CISHQ9NSE2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CISHQ9NSE2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CISHQ9NSE2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CISHQ9NSE2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.17■■□□□ 1.3
CISHQ9NSE2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.16■■□□□ 1.3
CISHQ9NSE2 EP400NL-214ENST00000641289 2402 ntBASIC23.16■■□□□ 1.3
CISHQ9NSE2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.16■■□□□ 1.3
CISHQ9NSE2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.16■■□□□ 1.3
CISHQ9NSE2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CISHQ9NSE2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CISHQ9NSE2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CISHQ9NSE2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CISHQ9NSE2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CISHQ9NSE2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
CISHQ9NSE2 OR7E47P-201ENST00000546390 1422 ntBASIC23.16■■□□□ 1.3
CISHQ9NSE2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CISHQ9NSE2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CISHQ9NSE2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CISHQ9NSE2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.15■■□□□ 1.3
CISHQ9NSE2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.15■■□□□ 1.3
CISHQ9NSE2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.15■■□□□ 1.3
CISHQ9NSE2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CISHQ9NSE2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CISHQ9NSE2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CISHQ9NSE2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CISHQ9NSE2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.15■■□□□ 1.3
CISHQ9NSE2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.15■■□□□ 1.3
CISHQ9NSE2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.15■■□□□ 1.3
CISHQ9NSE2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CISHQ9NSE2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.14■■□□□ 1.3
CISHQ9NSE2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CISHQ9NSE2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.14■■□□□ 1.3
CISHQ9NSE2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CISHQ9NSE2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
CISHQ9NSE2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CISHQ9NSE2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CISHQ9NSE2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CISHQ9NSE2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CISHQ9NSE2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.14■■□□□ 1.29
CISHQ9NSE2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CISHQ9NSE2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CISHQ9NSE2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CISHQ9NSE2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CISHQ9NSE2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CISHQ9NSE2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.14■■□□□ 1.29
CISHQ9NSE2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CISHQ9NSE2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CISHQ9NSE2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CISHQ9NSE2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CISHQ9NSE2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CISHQ9NSE2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CISHQ9NSE2 MIR572-201ENST00000384983 95 ntBASIC23.13■■□□□ 1.29
CISHQ9NSE2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CISHQ9NSE2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.13■■□□□ 1.29
CISHQ9NSE2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.13■■□□□ 1.29
CISHQ9NSE2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CISHQ9NSE2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CISHQ9NSE2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CISHQ9NSE2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CISHQ9NSE2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.12■■□□□ 1.29
CISHQ9NSE2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CISHQ9NSE2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CISHQ9NSE2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CISHQ9NSE2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CISHQ9NSE2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CISHQ9NSE2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CISHQ9NSE2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.12■■□□□ 1.29
CISHQ9NSE2 SMUG1P1-201ENST00000590640 811 ntBASIC23.12■■□□□ 1.29
CISHQ9NSE2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.12■■□□□ 1.29
CISHQ9NSE2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CISHQ9NSE2 AC092053.2-201ENST00000640557 1818 ntBASIC23.12■■□□□ 1.29
CISHQ9NSE2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CISHQ9NSE2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CISHQ9NSE2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CISHQ9NSE2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.11■■□□□ 1.29
CISHQ9NSE2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CISHQ9NSE2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CISHQ9NSE2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CISHQ9NSE2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CISHQ9NSE2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CISHQ9NSE2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CISHQ9NSE2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.1■■□□□ 1.29
CISHQ9NSE2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms