Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NECTIN3Q9NQS3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.71■□□□□ 0.91
NECTIN3Q9NQS3 AC019069.1-201ENST00000610008 1333 ntBASIC20.71■□□□□ 0.91
NECTIN3Q9NQS3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NECTIN3Q9NQS3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NECTIN3Q9NQS3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NECTIN3Q9NQS3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NECTIN3Q9NQS3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
NECTIN3Q9NQS3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 AC027682.1-201ENST00000562846 899 ntBASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NECTIN3Q9NQS3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.69■□□□□ 0.9
NECTIN3Q9NQS3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN3Q9NQS3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN3Q9NQS3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN3Q9NQS3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN3Q9NQS3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NECTIN3Q9NQS3 AC091305.1-201ENST00000479476 895 ntBASIC20.69■□□□□ 0.9
NECTIN3Q9NQS3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NECTIN3Q9NQS3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN3Q9NQS3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NECTIN3Q9NQS3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN3Q9NQS3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN3Q9NQS3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NECTIN3Q9NQS3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN3Q9NQS3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN3Q9NQS3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN3Q9NQS3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN3Q9NQS3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN3Q9NQS3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.68■□□□□ 0.9
NECTIN3Q9NQS3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN3Q9NQS3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.68■□□□□ 0.9
NECTIN3Q9NQS3 CA15P2-201ENST00000611168 834 ntBASIC20.68■□□□□ 0.9
NECTIN3Q9NQS3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN3Q9NQS3 SLC25A24-204ENST00000569674 2357 ntBASIC20.68■□□□□ 0.9
NECTIN3Q9NQS3 RASA4CP-201ENST00000424092 1398 ntBASIC20.68■□□□□ 0.9
NECTIN3Q9NQS3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NECTIN3Q9NQS3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NECTIN3Q9NQS3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NECTIN3Q9NQS3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NECTIN3Q9NQS3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.67■□□□□ 0.9
NECTIN3Q9NQS3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.67■□□□□ 0.9
NECTIN3Q9NQS3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.67■□□□□ 0.9
NECTIN3Q9NQS3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NECTIN3Q9NQS3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.67■□□□□ 0.9
NECTIN3Q9NQS3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NECTIN3Q9NQS3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NECTIN3Q9NQS3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NECTIN3Q9NQS3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
NECTIN3Q9NQS3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NECTIN3Q9NQS3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.66■□□□□ 0.9
NECTIN3Q9NQS3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NECTIN3Q9NQS3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.66■□□□□ 0.9
NECTIN3Q9NQS3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NECTIN3Q9NQS3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NECTIN3Q9NQS3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.66■□□□□ 0.9
NECTIN3Q9NQS3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
NECTIN3Q9NQS3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 AC126544.1-201ENST00000580842 1059 ntBASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.65■□□□□ 0.9
NECTIN3Q9NQS3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NECTIN3Q9NQS3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NECTIN3Q9NQS3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NECTIN3Q9NQS3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NECTIN3Q9NQS3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.64■□□□□ 0.89
NECTIN3Q9NQS3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NECTIN3Q9NQS3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NECTIN3Q9NQS3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NECTIN3Q9NQS3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
NECTIN3Q9NQS3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NECTIN3Q9NQS3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.64■□□□□ 0.89
NECTIN3Q9NQS3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.64■□□□□ 0.89
NECTIN3Q9NQS3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NECTIN3Q9NQS3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms