Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TIMMDC1Q9NPL8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
TIMMDC1Q9NPL8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMMDC1Q9NPL8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMMDC1Q9NPL8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TIMMDC1Q9NPL8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMMDC1Q9NPL8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMMDC1Q9NPL8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TIMMDC1Q9NPL8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TIMMDC1Q9NPL8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TIMMDC1Q9NPL8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMMDC1Q9NPL8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMMDC1Q9NPL8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TIMMDC1Q9NPL8 EDA-201ENST00000338901 1233 ntBASIC20.69■□□□□ 0.9
TIMMDC1Q9NPL8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.69■□□□□ 0.9
TIMMDC1Q9NPL8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.69■□□□□ 0.9
TIMMDC1Q9NPL8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.69■□□□□ 0.9
TIMMDC1Q9NPL8 AL138724.1-201ENST00000606771 1088 ntBASIC20.69■□□□□ 0.9
TIMMDC1Q9NPL8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.69■□□□□ 0.9
TIMMDC1Q9NPL8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMMDC1Q9NPL8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMMDC1Q9NPL8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TIMMDC1Q9NPL8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 AC142381.2-201ENST00000566120 298 ntBASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TIMMDC1Q9NPL8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 SERBP1P1-201ENST00000396021 1160 ntBASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 AL355001.2-201ENST00000620617 1191 ntBASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 AC009086.3-201ENST00000623486 1008 ntBASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TIMMDC1Q9NPL8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMMDC1Q9NPL8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMMDC1Q9NPL8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMMDC1Q9NPL8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMMDC1Q9NPL8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMMDC1Q9NPL8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMMDC1Q9NPL8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TIMMDC1Q9NPL8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TIMMDC1Q9NPL8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.66■□□□□ 0.9
TIMMDC1Q9NPL8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 ANOS2P-203ENST00000472227 1816 ntBASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TIMMDC1Q9NPL8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TIMMDC1Q9NPL8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
TIMMDC1Q9NPL8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TIMMDC1Q9NPL8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.64■□□□□ 0.89
TIMMDC1Q9NPL8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.64■□□□□ 0.89
TIMMDC1Q9NPL8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TIMMDC1Q9NPL8 AC011298.3-201ENST00000615796 283 ntBASIC20.64■□□□□ 0.89
TIMMDC1Q9NPL8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TIMMDC1Q9NPL8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TIMMDC1Q9NPL8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.64■□□□□ 0.89
TIMMDC1Q9NPL8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.64■□□□□ 0.89
TIMMDC1Q9NPL8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TIMMDC1Q9NPL8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TIMMDC1Q9NPL8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TIMMDC1Q9NPL8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TIMMDC1Q9NPL8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms