Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD8Q9HCK8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CHD8Q9HCK8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD8Q9HCK8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD8Q9HCK8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHD8Q9HCK8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.57■□□□□ 0.88
CHD8Q9HCK8 ARMC10P1-201ENST00000313754 855 ntBASIC20.57■□□□□ 0.88
CHD8Q9HCK8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHD8Q9HCK8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHD8Q9HCK8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHD8Q9HCK8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHD8Q9HCK8 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.57■□□□□ 0.88
CHD8Q9HCK8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHD8Q9HCK8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.57■□□□□ 0.88
CHD8Q9HCK8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHD8Q9HCK8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CHD8Q9HCK8 TMPOP1-202ENST00000424642 1267 ntBASIC20.56■□□□□ 0.88
CHD8Q9HCK8 AC012618.2-201ENST00000428058 849 ntBASIC20.56■□□□□ 0.88
CHD8Q9HCK8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHD8Q9HCK8 KRT18P35-201ENST00000510488 1269 ntBASIC20.56■□□□□ 0.88
CHD8Q9HCK8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.56■□□□□ 0.88
CHD8Q9HCK8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.56■□□□□ 0.88
CHD8Q9HCK8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHD8Q9HCK8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.56■□□□□ 0.88
CHD8Q9HCK8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHD8Q9HCK8 ALDH1A3-203ENST00000557963 1670 ntBASIC20.56■□□□□ 0.88
CHD8Q9HCK8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.55■□□□□ 0.88
CHD8Q9HCK8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.55■□□□□ 0.88
CHD8Q9HCK8 AC008694.1-202ENST00000636953 945 ntBASIC20.55■□□□□ 0.88
CHD8Q9HCK8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD8Q9HCK8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD8Q9HCK8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD8Q9HCK8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.55■□□□□ 0.88
CHD8Q9HCK8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD8Q9HCK8 AC097658.1-201ENST00000475555 843 ntBASIC20.55■□□□□ 0.88
CHD8Q9HCK8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHD8Q9HCK8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.55■□□□□ 0.88
CHD8Q9HCK8 AL359736.2-201ENST00000621992 437 ntBASIC20.55■□□□□ 0.88
CHD8Q9HCK8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD8Q9HCK8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHD8Q9HCK8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD8Q9HCK8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.54■□□□□ 0.88
CHD8Q9HCK8 C2orf69P4-201ENST00000565394 541 ntBASIC20.54■□□□□ 0.88
CHD8Q9HCK8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD8Q9HCK8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD8Q9HCK8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHD8Q9HCK8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD8Q9HCK8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHD8Q9HCK8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD8Q9HCK8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD8Q9HCK8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.53■□□□□ 0.88
CHD8Q9HCK8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD8Q9HCK8 AC007322.4-201ENST00000509611 723 ntBASIC20.53■□□□□ 0.88
CHD8Q9HCK8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.53■□□□□ 0.88
CHD8Q9HCK8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.53■□□□□ 0.88
CHD8Q9HCK8 FP325331.1-202ENST00000623531 1380 ntBASIC20.53■□□□□ 0.88
CHD8Q9HCK8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD8Q9HCK8 AC093787.1-201ENST00000450396 207 ntBASIC20.53■□□□□ 0.88
CHD8Q9HCK8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.53■□□□□ 0.88
CHD8Q9HCK8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.53■□□□□ 0.88
CHD8Q9HCK8 AC010501.1-201ENST00000606270 1962 ntBASIC20.52■□□□□ 0.88
CHD8Q9HCK8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD8Q9HCK8 POU5F1P4-201ENST00000413175 1085 ntBASIC20.52■□□□□ 0.88
CHD8Q9HCK8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.52■□□□□ 0.88
CHD8Q9HCK8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.52■□□□□ 0.88
CHD8Q9HCK8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.52■□□□□ 0.88
CHD8Q9HCK8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD8Q9HCK8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD8Q9HCK8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CHD8Q9HCK8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CHD8Q9HCK8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD8Q9HCK8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.52■□□□□ 0.88
CHD8Q9HCK8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CHD8Q9HCK8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CHD8Q9HCK8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 RPPH1-201ENST00000516869 333 ntBASIC20.51■□□□□ 0.87
CHD8Q9HCK8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 AC012306.2-201ENST00000609350 630 ntBASIC20.51■□□□□ 0.87
CHD8Q9HCK8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 AL512625.2-201ENST00000417533 625 ntBASIC20.51■□□□□ 0.87
CHD8Q9HCK8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.51■□□□□ 0.87
CHD8Q9HCK8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD8Q9HCK8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.5■□□□□ 0.87
CHD8Q9HCK8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD8Q9HCK8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHD8Q9HCK8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHD8Q9HCK8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.5■□□□□ 0.87
CHD8Q9HCK8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.5■□□□□ 0.87
CHD8Q9HCK8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms