Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 AC055733.4-201ENST00000638462 1354 ntBASIC23.37■■□□□ 1.33
RC3H2Q9HBD1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.37■■□□□ 1.33
RC3H2Q9HBD1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 ABCB10P4-201ENST00000566803 2184 ntBASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 KRT18P6-201ENST00000555540 1265 ntBASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H2Q9HBD1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 CNN2P6-201ENST00000439038 900 ntBASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 TSPY20P-201ENST00000450910 630 ntBASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RC3H2Q9HBD1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
RC3H2Q9HBD1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
RC3H2Q9HBD1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
RC3H2Q9HBD1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RC3H2Q9HBD1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.34■■□□□ 1.33
RC3H2Q9HBD1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RC3H2Q9HBD1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.34■■□□□ 1.33
RC3H2Q9HBD1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.34■■□□□ 1.33
RC3H2Q9HBD1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.34■■□□□ 1.33
RC3H2Q9HBD1 AP001160.3-201ENST00000601484 763 ntBASIC23.34■■□□□ 1.33
RC3H2Q9HBD1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.34■■□□□ 1.33
RC3H2Q9HBD1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RC3H2Q9HBD1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RC3H2Q9HBD1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RC3H2Q9HBD1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RC3H2Q9HBD1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.33■■□□□ 1.33
RC3H2Q9HBD1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
RC3H2Q9HBD1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.33■■□□□ 1.33
RC3H2Q9HBD1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RC3H2Q9HBD1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RC3H2Q9HBD1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
RC3H2Q9HBD1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RC3H2Q9HBD1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RC3H2Q9HBD1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RC3H2Q9HBD1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H2Q9HBD1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H2Q9HBD1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.32■■□□□ 1.32
RC3H2Q9HBD1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H2Q9HBD1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.32■■□□□ 1.32
RC3H2Q9HBD1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RC3H2Q9HBD1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.32■■□□□ 1.32
RC3H2Q9HBD1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.32■■□□□ 1.32
RC3H2Q9HBD1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H2Q9HBD1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H2Q9HBD1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RC3H2Q9HBD1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RC3H2Q9HBD1 DUSP8P5-201ENST00000422884 1815 ntBASIC23.31■■□□□ 1.32
RC3H2Q9HBD1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RC3H2Q9HBD1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RC3H2Q9HBD1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.31■■□□□ 1.32
RC3H2Q9HBD1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RC3H2Q9HBD1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.31■■□□□ 1.32
RC3H2Q9HBD1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
RC3H2Q9HBD1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RC3H2Q9HBD1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 AC069152.1-201ENST00000438030 544 ntBASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RC3H2Q9HBD1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
RC3H2Q9HBD1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RC3H2Q9HBD1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RC3H2Q9HBD1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms