Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
RNF39Q9H2S5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RNF39Q9H2S5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF39Q9H2S5 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC23.75■■□□□ 1.39
RNF39Q9H2S5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RNF39Q9H2S5 SMUG1P1-201ENST00000590640 811 ntBASIC23.75■■□□□ 1.39
RNF39Q9H2S5 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC23.75■■□□□ 1.39
RNF39Q9H2S5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF39Q9H2S5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF39Q9H2S5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF39Q9H2S5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.74■■□□□ 1.39
RNF39Q9H2S5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF39Q9H2S5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.74■■□□□ 1.39
RNF39Q9H2S5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.74■■□□□ 1.39
RNF39Q9H2S5 RPL12P24-201ENST00000474907 486 ntBASIC23.74■■□□□ 1.39
RNF39Q9H2S5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF39Q9H2S5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.74■■□□□ 1.39
RNF39Q9H2S5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF39Q9H2S5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
RNF39Q9H2S5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.74■■□□□ 1.39
RNF39Q9H2S5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF39Q9H2S5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.74■■□□□ 1.39
RNF39Q9H2S5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF39Q9H2S5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.74■■□□□ 1.39
RNF39Q9H2S5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF39Q9H2S5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.73■■□□□ 1.39
RNF39Q9H2S5 NTF6G-201ENST00000591094 616 ntBASIC23.73■■□□□ 1.39
RNF39Q9H2S5 TPRG1LP1-201ENST00000598702 760 ntBASIC23.73■■□□□ 1.39
RNF39Q9H2S5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.73■■□□□ 1.39
RNF39Q9H2S5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
RNF39Q9H2S5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF39Q9H2S5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF39Q9H2S5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.72■■□□□ 1.39
RNF39Q9H2S5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.72■■□□□ 1.39
RNF39Q9H2S5 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC23.72■■□□□ 1.39
RNF39Q9H2S5 AC092437.1-201ENST00000624794 1048 ntBASIC23.72■■□□□ 1.39
RNF39Q9H2S5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF39Q9H2S5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF39Q9H2S5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RNF39Q9H2S5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF39Q9H2S5 OXCT2P1-201ENST00000447263 1535 ntBASIC23.71■■□□□ 1.39
RNF39Q9H2S5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.71■■□□□ 1.39
RNF39Q9H2S5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF39Q9H2S5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF39Q9H2S5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF39Q9H2S5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF39Q9H2S5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF39Q9H2S5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RNF39Q9H2S5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
RNF39Q9H2S5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF39Q9H2S5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.71■■□□□ 1.39
RNF39Q9H2S5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.71■■□□□ 1.39
RNF39Q9H2S5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF39Q9H2S5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF39Q9H2S5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.7■■□□□ 1.39
RNF39Q9H2S5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RNF39Q9H2S5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RNF39Q9H2S5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RNF39Q9H2S5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
RNF39Q9H2S5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RNF39Q9H2S5 KRT18P61-201ENST00000585825 1298 ntBASIC23.7■■□□□ 1.38
RNF39Q9H2S5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.7■■□□□ 1.38
RNF39Q9H2S5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RNF39Q9H2S5 AC087239.1-201ENST00000622671 572 ntBASIC23.7■■□□□ 1.38
RNF39Q9H2S5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
RNF39Q9H2S5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RNF39Q9H2S5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RNF39Q9H2S5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.7■■□□□ 1.38
RNF39Q9H2S5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
RNF39Q9H2S5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RNF39Q9H2S5 BX005040.4-201ENST00000637145 1518 ntBASIC23.69■■□□□ 1.38
RNF39Q9H2S5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
RNF39Q9H2S5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF39Q9H2S5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF39Q9H2S5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
RNF39Q9H2S5 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC23.69■■□□□ 1.38
RNF39Q9H2S5 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
RNF39Q9H2S5 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF39Q9H2S5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF39Q9H2S5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.69■■□□□ 1.38
RNF39Q9H2S5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF39Q9H2S5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF39Q9H2S5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
RNF39Q9H2S5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF39Q9H2S5 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF39Q9H2S5 AL355578.1-201ENST00000607405 1328 ntBASIC23.68■■□□□ 1.38
RNF39Q9H2S5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF39Q9H2S5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF39Q9H2S5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF39Q9H2S5 AC007688.1-201ENST00000475592 759 ntBASIC23.68■■□□□ 1.38
RNF39Q9H2S5 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC23.68■■□□□ 1.38
RNF39Q9H2S5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF39Q9H2S5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF39Q9H2S5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF39Q9H2S5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF39Q9H2S5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF39Q9H2S5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
RNF39Q9H2S5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
RNF39Q9H2S5 AC022762.2-201ENST00000600308 1353 ntBASIC23.67■■□□□ 1.38
RNF39Q9H2S5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms