Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDH11YQ9BZA8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.45■■■□□ 2.15
PCDH11YQ9BZA8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC28.45■■■□□ 2.15
PCDH11YQ9BZA8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
PCDH11YQ9BZA8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
PCDH11YQ9BZA8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC28.45■■■□□ 2.14
PCDH11YQ9BZA8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.14
PCDH11YQ9BZA8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PCDH11YQ9BZA8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC28.45■■■□□ 2.14
PCDH11YQ9BZA8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PCDH11YQ9BZA8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
PCDH11YQ9BZA8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC28.44■■■□□ 2.14
PCDH11YQ9BZA8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC28.44■■■□□ 2.14
PCDH11YQ9BZA8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
PCDH11YQ9BZA8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 AP001160.3-201ENST00000601484 763 ntBASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 AC055733.4-201ENST00000638462 1354 ntBASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 TMEM191A-211ENST00000637163 1067 ntBASIC28.43■■■□□ 2.14
PCDH11YQ9BZA8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC28.42■■■□□ 2.14
PCDH11YQ9BZA8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDH11YQ9BZA8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
PCDH11YQ9BZA8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC28.42■■■□□ 2.14
PCDH11YQ9BZA8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDH11YQ9BZA8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
PCDH11YQ9BZA8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC28.42■■■□□ 2.14
PCDH11YQ9BZA8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PCDH11YQ9BZA8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PCDH11YQ9BZA8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
PCDH11YQ9BZA8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCDH11YQ9BZA8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
PCDH11YQ9BZA8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDH11YQ9BZA8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC28.41■■■□□ 2.14
PCDH11YQ9BZA8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
PCDH11YQ9BZA8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC28.41■■■□□ 2.14
PCDH11YQ9BZA8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC28.41■■■□□ 2.14
PCDH11YQ9BZA8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCDH11YQ9BZA8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC28.41■■■□□ 2.14
PCDH11YQ9BZA8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PCDH11YQ9BZA8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC28.41■■■□□ 2.14
PCDH11YQ9BZA8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC28.41■■■□□ 2.14
PCDH11YQ9BZA8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
PCDH11YQ9BZA8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC28.41■■■□□ 2.14
PCDH11YQ9BZA8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDH11YQ9BZA8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDH11YQ9BZA8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PCDH11YQ9BZA8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDH11YQ9BZA8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC28.4■■■□□ 2.14
PCDH11YQ9BZA8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDH11YQ9BZA8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
PCDH11YQ9BZA8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCDH11YQ9BZA8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC28.4■■■□□ 2.14
PCDH11YQ9BZA8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
PCDH11YQ9BZA8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCDH11YQ9BZA8 DUSP8P5-201ENST00000422884 1815 ntBASIC28.39■■■□□ 2.14
PCDH11YQ9BZA8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCDH11YQ9BZA8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
PCDH11YQ9BZA8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
PCDH11YQ9BZA8 KRT18P6-201ENST00000555540 1265 ntBASIC28.39■■■□□ 2.13
PCDH11YQ9BZA8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDH11YQ9BZA8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
PCDH11YQ9BZA8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDH11YQ9BZA8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC28.38■■■□□ 2.13
PCDH11YQ9BZA8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC28.38■■■□□ 2.13
PCDH11YQ9BZA8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC28.38■■■□□ 2.13
PCDH11YQ9BZA8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC28.38■■■□□ 2.13
PCDH11YQ9BZA8 AL138781.1-201ENST00000566567 1274 ntBASIC28.38■■■□□ 2.13
PCDH11YQ9BZA8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDH11YQ9BZA8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDH11YQ9BZA8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC28.38■■■□□ 2.13
PCDH11YQ9BZA8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCDH11YQ9BZA8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
PCDH11YQ9BZA8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDH11YQ9BZA8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PCDH11YQ9BZA8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDH11YQ9BZA8 CNN2P6-201ENST00000439038 900 ntBASIC28.37■■■□□ 2.13
PCDH11YQ9BZA8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC28.37■■■□□ 2.13
PCDH11YQ9BZA8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC28.37■■■□□ 2.13
PCDH11YQ9BZA8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC28.37■■■□□ 2.13
PCDH11YQ9BZA8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC28.37■■■□□ 2.13
PCDH11YQ9BZA8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC28.37■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms