Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 TNRC18P3-201ENST00000441896 2691 ntBASIC10.66□□□□□ -0.7
PRAC1Q96KF2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 AC005229.4-201ENST00000610085 2198 ntBASIC10.66□□□□□ -0.7
PRAC1Q96KF2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC10.66□□□□□ -0.7
PRAC1Q96KF2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
PRAC1Q96KF2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
PRAC1Q96KF2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PRAC1Q96KF2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC10.65□□□□□ -0.71
PRAC1Q96KF2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
PRAC1Q96KF2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC10.65□□□□□ -0.71
PRAC1Q96KF2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
PRAC1Q96KF2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 AC112907.3-201ENST00000577781 2400 ntBASIC10.64□□□□□ -0.71
PRAC1Q96KF2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 AC098818.2-201ENST00000564925 2320 ntBASIC10.64□□□□□ -0.71
PRAC1Q96KF2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 AL391005.1-201ENST00000623953 2435 ntBASIC10.64□□□□□ -0.71
PRAC1Q96KF2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 AC007613.1-201ENST00000572811 2597 ntBASIC10.64□□□□□ -0.71
PRAC1Q96KF2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PRAC1Q96KF2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PRAC1Q96KF2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms