Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
DDX11Q96FC9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.67■■□□□ 1.7
DDX11Q96FC9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
DDX11Q96FC9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
DDX11Q96FC9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.67■■□□□ 1.7
DDX11Q96FC9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX11Q96FC9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX11Q96FC9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.67■■□□□ 1.7
DDX11Q96FC9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
DDX11Q96FC9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
DDX11Q96FC9 AC242852.2-201ENST00000615738 1807 ntBASIC25.67■■□□□ 1.7
DDX11Q96FC9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.67■■□□□ 1.7
DDX11Q96FC9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
DDX11Q96FC9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.66■■□□□ 1.7
DDX11Q96FC9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX11Q96FC9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.66■■□□□ 1.7
DDX11Q96FC9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
DDX11Q96FC9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.66■■□□□ 1.7
DDX11Q96FC9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.66■■□□□ 1.7
DDX11Q96FC9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
DDX11Q96FC9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX11Q96FC9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
DDX11Q96FC9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
DDX11Q96FC9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX11Q96FC9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
DDX11Q96FC9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX11Q96FC9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
DDX11Q96FC9 AC133637.1-201ENST00000624115 1537 ntBASIC25.65■■□□□ 1.7
DDX11Q96FC9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
DDX11Q96FC9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX11Q96FC9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.65■■□□□ 1.7
DDX11Q96FC9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.65■■□□□ 1.7
DDX11Q96FC9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.65■■□□□ 1.7
DDX11Q96FC9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.65■■□□□ 1.7
DDX11Q96FC9 LINC01960-201ENST00000563759 1884 ntBASIC25.65■■□□□ 1.7
DDX11Q96FC9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX11Q96FC9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
DDX11Q96FC9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.64■■□□□ 1.7
DDX11Q96FC9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
DDX11Q96FC9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
DDX11Q96FC9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
DDX11Q96FC9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
DDX11Q96FC9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
DDX11Q96FC9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
DDX11Q96FC9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
DDX11Q96FC9 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.64■■□□□ 1.7
DDX11Q96FC9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.64■■□□□ 1.7
DDX11Q96FC9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.64■■□□□ 1.7
DDX11Q96FC9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.64■■□□□ 1.7
DDX11Q96FC9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.64■■□□□ 1.7
DDX11Q96FC9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
DDX11Q96FC9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
DDX11Q96FC9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
DDX11Q96FC9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
DDX11Q96FC9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
DDX11Q96FC9 AC139530.1-201ENST00000575312 1977 ntBASIC25.64■■□□□ 1.69
DDX11Q96FC9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
DDX11Q96FC9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX11Q96FC9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.63■■□□□ 1.69
DDX11Q96FC9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
DDX11Q96FC9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX11Q96FC9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX11Q96FC9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX11Q96FC9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.63■■□□□ 1.69
DDX11Q96FC9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
DDX11Q96FC9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
DDX11Q96FC9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.63■■□□□ 1.69
DDX11Q96FC9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.62■■□□□ 1.69
DDX11Q96FC9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX11Q96FC9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
DDX11Q96FC9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX11Q96FC9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
DDX11Q96FC9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX11Q96FC9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.62■■□□□ 1.69
DDX11Q96FC9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
DDX11Q96FC9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX11Q96FC9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX11Q96FC9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
DDX11Q96FC9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
DDX11Q96FC9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX11Q96FC9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
DDX11Q96FC9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX11Q96FC9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX11Q96FC9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
DDX11Q96FC9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.61■■□□□ 1.69
DDX11Q96FC9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
DDX11Q96FC9 AC034268.1-201ENST00000441047 882 ntBASIC25.61■■□□□ 1.69
DDX11Q96FC9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.61■■□□□ 1.69
DDX11Q96FC9 AL499627.2-201ENST00000606283 725 ntBASIC25.61■■□□□ 1.69
DDX11Q96FC9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX11Q96FC9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX11Q96FC9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX11Q96FC9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
DDX11Q96FC9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.61■■□□□ 1.69
DDX11Q96FC9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX11Q96FC9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
DDX11Q96FC9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
DDX11Q96FC9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
DDX11Q96FC9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
DDX11Q96FC9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms