Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1AQ96BI3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
APH1AQ96BI3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
APH1AQ96BI3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.18■□□□□ 0.66
APH1AQ96BI3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1AQ96BI3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1AQ96BI3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.18■□□□□ 0.66
APH1AQ96BI3 SMUG1P1-201ENST00000590640 811 ntBASIC19.18■□□□□ 0.66
APH1AQ96BI3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.18■□□□□ 0.66
APH1AQ96BI3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APH1AQ96BI3 MIR6084-201ENST00000622012 110 ntBASIC19.18■□□□□ 0.66
APH1AQ96BI3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.18■□□□□ 0.66
APH1AQ96BI3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1AQ96BI3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
APH1AQ96BI3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1AQ96BI3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.18■□□□□ 0.66
APH1AQ96BI3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APH1AQ96BI3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APH1AQ96BI3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
APH1AQ96BI3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APH1AQ96BI3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.17■□□□□ 0.66
APH1AQ96BI3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.17■□□□□ 0.66
APH1AQ96BI3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
APH1AQ96BI3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APH1AQ96BI3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APH1AQ96BI3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APH1AQ96BI3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.17■□□□□ 0.66
APH1AQ96BI3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.17■□□□□ 0.66
APH1AQ96BI3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
APH1AQ96BI3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APH1AQ96BI3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APH1AQ96BI3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
APH1AQ96BI3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.17■□□□□ 0.66
APH1AQ96BI3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
APH1AQ96BI3 OR7E47P-201ENST00000546390 1422 ntBASIC19.17■□□□□ 0.66
APH1AQ96BI3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1AQ96BI3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.16■□□□□ 0.66
APH1AQ96BI3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1AQ96BI3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APH1AQ96BI3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.16■□□□□ 0.66
APH1AQ96BI3 AC137767.1-201ENST00000602918 1920 ntBASIC19.16■□□□□ 0.66
APH1AQ96BI3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1AQ96BI3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
APH1AQ96BI3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1AQ96BI3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
APH1AQ96BI3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.16■□□□□ 0.66
APH1AQ96BI3 AC027612.3-201ENST00000413684 1047 ntBASIC19.16■□□□□ 0.66
APH1AQ96BI3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APH1AQ96BI3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APH1AQ96BI3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.16■□□□□ 0.66
APH1AQ96BI3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1AQ96BI3 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.16■□□□□ 0.66
APH1AQ96BI3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1AQ96BI3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
APH1AQ96BI3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APH1AQ96BI3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1AQ96BI3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1AQ96BI3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1AQ96BI3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
APH1AQ96BI3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APH1AQ96BI3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.15■□□□□ 0.66
APH1AQ96BI3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APH1AQ96BI3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.15■□□□□ 0.66
APH1AQ96BI3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APH1AQ96BI3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
APH1AQ96BI3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APH1AQ96BI3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
APH1AQ96BI3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.15■□□□□ 0.66
APH1AQ96BI3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.15■□□□□ 0.66
APH1AQ96BI3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.15■□□□□ 0.66
APH1AQ96BI3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.15■□□□□ 0.66
APH1AQ96BI3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APH1AQ96BI3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APH1AQ96BI3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.15■□□□□ 0.66
APH1AQ96BI3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
APH1AQ96BI3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.14■□□□□ 0.65
APH1AQ96BI3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APH1AQ96BI3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
APH1AQ96BI3 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.14■□□□□ 0.65
APH1AQ96BI3 YBX1P1-201ENST00000445822 960 ntBASIC19.14■□□□□ 0.65
APH1AQ96BI3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
APH1AQ96BI3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APH1AQ96BI3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APH1AQ96BI3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APH1AQ96BI3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APH1AQ96BI3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
APH1AQ96BI3 AC068473.5-201ENST00000616428 2072 ntBASIC19.13■□□□□ 0.65
APH1AQ96BI3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.13■□□□□ 0.65
APH1AQ96BI3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APH1AQ96BI3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APH1AQ96BI3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APH1AQ96BI3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
APH1AQ96BI3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
APH1AQ96BI3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
APH1AQ96BI3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APH1AQ96BI3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APH1AQ96BI3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.13■□□□□ 0.65
APH1AQ96BI3 RARRES2P6-201ENST00000567333 442 ntBASIC19.13■□□□□ 0.65
APH1AQ96BI3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.13■□□□□ 0.65
APH1AQ96BI3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms