Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS33AQ96AX1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS33AQ96AX1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS33AQ96AX1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.78■□□□□ 0.92
VPS33AQ96AX1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VPS33AQ96AX1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
VPS33AQ96AX1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS33AQ96AX1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VPS33AQ96AX1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
VPS33AQ96AX1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS33AQ96AX1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS33AQ96AX1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS33AQ96AX1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VPS33AQ96AX1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.77■□□□□ 0.92
VPS33AQ96AX1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS33AQ96AX1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VPS33AQ96AX1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VPS33AQ96AX1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
VPS33AQ96AX1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
VPS33AQ96AX1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
VPS33AQ96AX1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VPS33AQ96AX1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
VPS33AQ96AX1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS33AQ96AX1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS33AQ96AX1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS33AQ96AX1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS33AQ96AX1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.76■□□□□ 0.91
VPS33AQ96AX1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS33AQ96AX1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VPS33AQ96AX1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
VPS33AQ96AX1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS33AQ96AX1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS33AQ96AX1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VPS33AQ96AX1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS33AQ96AX1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VPS33AQ96AX1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VPS33AQ96AX1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS33AQ96AX1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 C17orf82-201ENST00000623772 1530 ntBASIC20.73■□□□□ 0.91
VPS33AQ96AX1 AC244015.2-201ENST00000616358 1861 ntBASIC20.73■□□□□ 0.91
VPS33AQ96AX1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
VPS33AQ96AX1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS33AQ96AX1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VPS33AQ96AX1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VPS33AQ96AX1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.72■□□□□ 0.91
VPS33AQ96AX1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS33AQ96AX1 MTDHP2-201ENST00000601468 714 ntBASIC20.72■□□□□ 0.91
VPS33AQ96AX1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VPS33AQ96AX1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
VPS33AQ96AX1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
VPS33AQ96AX1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS33AQ96AX1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.72■□□□□ 0.91
VPS33AQ96AX1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VPS33AQ96AX1 SLC25A24-204ENST00000569674 2357 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms