Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP9XQ93008 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
USP9XQ93008 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
USP9XQ93008 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP9XQ93008 AC004687.1-201ENST00000579003 1625 ntBASIC19.18■□□□□ 0.66
USP9XQ93008 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
USP9XQ93008 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
USP9XQ93008 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
USP9XQ93008 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP9XQ93008 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
USP9XQ93008 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP9XQ93008 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.17■□□□□ 0.66
USP9XQ93008 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.17■□□□□ 0.66
USP9XQ93008 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.17■□□□□ 0.66
USP9XQ93008 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP9XQ93008 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP9XQ93008 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.17■□□□□ 0.66
USP9XQ93008 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.17■□□□□ 0.66
USP9XQ93008 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
USP9XQ93008 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.17■□□□□ 0.66
USP9XQ93008 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP9XQ93008 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
USP9XQ93008 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.17■□□□□ 0.66
USP9XQ93008 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP9XQ93008 AC068338.2-201ENST00000563278 1430 ntBASIC19.17■□□□□ 0.66
USP9XQ93008 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP9XQ93008 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
USP9XQ93008 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP9XQ93008 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.16■□□□□ 0.66
USP9XQ93008 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP9XQ93008 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.16■□□□□ 0.66
USP9XQ93008 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
USP9XQ93008 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.16■□□□□ 0.66
USP9XQ93008 AC073648.6-201ENST00000641589 218 ntBASIC19.16■□□□□ 0.66
USP9XQ93008 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP9XQ93008 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP9XQ93008 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP9XQ93008 CYP2T1P-201ENST00000432607 1285 ntBASIC19.16■□□□□ 0.66
USP9XQ93008 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
USP9XQ93008 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.16■□□□□ 0.66
USP9XQ93008 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP9XQ93008 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP9XQ93008 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP9XQ93008 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP9XQ93008 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP9XQ93008 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP9XQ93008 AC026366.1-201ENST00000488803 879 ntBASIC19.15■□□□□ 0.66
USP9XQ93008 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.15■□□□□ 0.66
USP9XQ93008 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
USP9XQ93008 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
USP9XQ93008 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP9XQ93008 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP9XQ93008 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
USP9XQ93008 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
USP9XQ93008 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.14■□□□□ 0.65
USP9XQ93008 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.14■□□□□ 0.65
USP9XQ93008 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.14■□□□□ 0.65
USP9XQ93008 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.14■□□□□ 0.65
USP9XQ93008 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.14■□□□□ 0.65
USP9XQ93008 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.14■□□□□ 0.65
USP9XQ93008 AC007322.4-201ENST00000509611 723 ntBASIC19.14■□□□□ 0.65
USP9XQ93008 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.14■□□□□ 0.65
USP9XQ93008 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.14■□□□□ 0.65
USP9XQ93008 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
USP9XQ93008 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP9XQ93008 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.13■□□□□ 0.65
USP9XQ93008 MIPEPP3-201ENST00000412105 444 ntBASIC19.13■□□□□ 0.65
USP9XQ93008 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
USP9XQ93008 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
USP9XQ93008 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP9XQ93008 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
USP9XQ93008 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.13■□□□□ 0.65
USP9XQ93008 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP9XQ93008 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP9XQ93008 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.13■□□□□ 0.65
USP9XQ93008 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USP9XQ93008 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.13■□□□□ 0.65
USP9XQ93008 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.13■□□□□ 0.65
USP9XQ93008 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
USP9XQ93008 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP9XQ93008 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.12■□□□□ 0.65
USP9XQ93008 MIR4497-201ENST00000583208 89 ntBASIC19.12■□□□□ 0.65
USP9XQ93008 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP9XQ93008 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.12■□□□□ 0.65
USP9XQ93008 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.12■□□□□ 0.65
USP9XQ93008 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP9XQ93008 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP9XQ93008 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP9XQ93008 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP9XQ93008 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP9XQ93008 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.12■□□□□ 0.65
USP9XQ93008 OR10C1-204ENST00000622521 1039 ntBASIC19.12■□□□□ 0.65
USP9XQ93008 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP9XQ93008 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP9XQ93008 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.12■□□□□ 0.65
USP9XQ93008 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP9XQ93008 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.11■□□□□ 0.65
USP9XQ93008 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP9XQ93008 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP9XQ93008 BX276092.2-201ENST00000417668 665 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms