Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.61■□□□□ 0.73
HPS1Q92902 MTDHP2-201ENST00000601468 714 ntBASIC19.61■□□□□ 0.73
HPS1Q92902 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.61■□□□□ 0.73
HPS1Q92902 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HPS1Q92902 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HPS1Q92902 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HPS1Q92902 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HPS1Q92902 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HPS1Q92902 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HPS1Q92902 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS1Q92902 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HPS1Q92902 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HPS1Q92902 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HPS1Q92902 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS1Q92902 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HPS1Q92902 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
HPS1Q92902 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HPS1Q92902 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS1Q92902 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS1Q92902 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HPS1Q92902 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HPS1Q92902 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
HPS1Q92902 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.59■□□□□ 0.73
HPS1Q92902 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.59■□□□□ 0.73
HPS1Q92902 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.59■□□□□ 0.73
HPS1Q92902 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.59■□□□□ 0.73
HPS1Q92902 MIR6724-1-201ENST00000616420 92 ntBASIC19.59■□□□□ 0.73
HPS1Q92902 MIR6724-2-201ENST00000616483 92 ntBASIC19.59■□□□□ 0.73
HPS1Q92902 MIR6724-4-201ENST00000617390 92 ntBASIC19.59■□□□□ 0.73
HPS1Q92902 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.59■□□□□ 0.73
HPS1Q92902 MIR6724-3-201ENST00000622482 92 ntBASIC19.59■□□□□ 0.73
HPS1Q92902 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS1Q92902 AC092068.2-201ENST00000590491 1708 ntBASIC19.59■□□□□ 0.73
HPS1Q92902 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.59■□□□□ 0.73
HPS1Q92902 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HPS1Q92902 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HPS1Q92902 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HPS1Q92902 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HPS1Q92902 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
HPS1Q92902 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HPS1Q92902 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.58■□□□□ 0.73
HPS1Q92902 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.58■□□□□ 0.72
HPS1Q92902 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.58■□□□□ 0.72
HPS1Q92902 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.58■□□□□ 0.72
HPS1Q92902 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.58■□□□□ 0.72
HPS1Q92902 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HPS1Q92902 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.58■□□□□ 0.72
HPS1Q92902 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HPS1Q92902 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HPS1Q92902 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HPS1Q92902 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HPS1Q92902 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HPS1Q92902 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HPS1Q92902 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
HPS1Q92902 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HPS1Q92902 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS1Q92902 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.57■□□□□ 0.72
HPS1Q92902 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HPS1Q92902 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS1Q92902 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HPS1Q92902 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
HPS1Q92902 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.57■□□□□ 0.72
HPS1Q92902 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HPS1Q92902 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HPS1Q92902 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS1Q92902 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS1Q92902 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.57■□□□□ 0.72
HPS1Q92902 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HPS1Q92902 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS1Q92902 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HPS1Q92902 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS1Q92902 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS1Q92902 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HPS1Q92902 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS1Q92902 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS1Q92902 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS1Q92902 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS1Q92902 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HPS1Q92902 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.56■□□□□ 0.72
HPS1Q92902 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.56■□□□□ 0.72
HPS1Q92902 AL356740.2-201ENST00000601559 647 ntBASIC19.56■□□□□ 0.72
HPS1Q92902 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.56■□□□□ 0.72
HPS1Q92902 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS1Q92902 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HPS1Q92902 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.55■□□□□ 0.72
HPS1Q92902 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS1Q92902 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.55■□□□□ 0.72
HPS1Q92902 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HPS1Q92902 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HPS1Q92902 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS1Q92902 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS1Q92902 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HPS1Q92902 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HPS1Q92902 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HPS1Q92902 MIR3621-201ENST00000580529 85 ntBASIC19.55■□□□□ 0.72
HPS1Q92902 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.55■□□□□ 0.72
HPS1Q92902 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.55■□□□□ 0.72
HPS1Q92902 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS1Q92902 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HPS1Q92902 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms