Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4IP1Q8WWV3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4IP1Q8WWV3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RTN4IP1Q8WWV3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RTN4IP1Q8WWV3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.17■□□□□ 0.5
RTN4IP1Q8WWV3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN4IP1Q8WWV3 AC009102.2-201ENST00000606772 1639 ntBASIC18.16■□□□□ 0.5
RTN4IP1Q8WWV3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4IP1Q8WWV3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.16■□□□□ 0.5
RTN4IP1Q8WWV3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.16■□□□□ 0.5
RTN4IP1Q8WWV3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN4IP1Q8WWV3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN4IP1Q8WWV3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4IP1Q8WWV3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.16■□□□□ 0.5
RTN4IP1Q8WWV3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4IP1Q8WWV3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.16■□□□□ 0.5
RTN4IP1Q8WWV3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.16■□□□□ 0.5
RTN4IP1Q8WWV3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTN4IP1Q8WWV3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 AL356441.2-201ENST00000443009 864 ntBASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.15■□□□□ 0.5
RTN4IP1Q8WWV3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RTN4IP1Q8WWV3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
RTN4IP1Q8WWV3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.14■□□□□ 0.5
RTN4IP1Q8WWV3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RTN4IP1Q8WWV3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RTN4IP1Q8WWV3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4IP1Q8WWV3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4IP1Q8WWV3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.14■□□□□ 0.49
RTN4IP1Q8WWV3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4IP1Q8WWV3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.14■□□□□ 0.49
RTN4IP1Q8WWV3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4IP1Q8WWV3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.14■□□□□ 0.49
RTN4IP1Q8WWV3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4IP1Q8WWV3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTN4IP1Q8WWV3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4IP1Q8WWV3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4IP1Q8WWV3 LINC01529-204ENST00000636474 1715 ntBASIC18.13■□□□□ 0.49
RTN4IP1Q8WWV3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
RTN4IP1Q8WWV3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RTN4IP1Q8WWV3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4IP1Q8WWV3 AL356740.2-201ENST00000601559 647 ntBASIC18.13■□□□□ 0.49
RTN4IP1Q8WWV3 AL117332.1-201ENST00000622628 974 ntBASIC18.13■□□□□ 0.49
RTN4IP1Q8WWV3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTN4IP1Q8WWV3 LINC01960-201ENST00000563759 1884 ntBASIC18.13■□□□□ 0.49
RTN4IP1Q8WWV3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.13■□□□□ 0.49
RTN4IP1Q8WWV3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RTN4IP1Q8WWV3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RTN4IP1Q8WWV3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.12■□□□□ 0.49
RTN4IP1Q8WWV3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4IP1Q8WWV3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.12■□□□□ 0.49
RTN4IP1Q8WWV3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4IP1Q8WWV3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4IP1Q8WWV3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4IP1Q8WWV3 FP325331.1-202ENST00000623531 1380 ntBASIC18.12■□□□□ 0.49
RTN4IP1Q8WWV3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTN4IP1Q8WWV3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 347.6 ms