Protein–RNA interactions for Protein: Q8TCA0

LRRC20, Leucine-rich repeat-containing protein 20, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC20Q8TCA0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC20Q8TCA0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC20Q8TCA0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC20Q8TCA0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC20Q8TCA0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC20Q8TCA0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC20Q8TCA0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRC20Q8TCA0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LRRC20Q8TCA0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC20Q8TCA0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC20Q8TCA0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC20Q8TCA0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.15■□□□□ 0.5
LRRC20Q8TCA0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC20Q8TCA0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.15■□□□□ 0.5
LRRC20Q8TCA0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRC20Q8TCA0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC20Q8TCA0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC20Q8TCA0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC20Q8TCA0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.14■□□□□ 0.5
LRRC20Q8TCA0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC20Q8TCA0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC20Q8TCA0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC20Q8TCA0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC20Q8TCA0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC20Q8TCA0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC20Q8TCA0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LRRC20Q8TCA0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC20Q8TCA0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LRRC20Q8TCA0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LRRC20Q8TCA0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC20Q8TCA0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LRRC20Q8TCA0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 FAM99A-202ENST00000538190 1989 ntBASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC20Q8TCA0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC20Q8TCA0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 MIR3960-201ENST00000583311 91 ntBASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC20Q8TCA0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRC20Q8TCA0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms