Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 AL024507.2-201ENST00000606070 2574 ntBASIC21.34■■□□□ 1.01
HMGCLL1Q8TB92 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HMGCLL1Q8TB92 AL031432.3-201ENST00000607698 485 ntBASIC21.34■■□□□ 1.01
HMGCLL1Q8TB92 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.34■■□□□ 1.01
HMGCLL1Q8TB92 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.34■■□□□ 1.01
HMGCLL1Q8TB92 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLL1Q8TB92 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HMGCLL1Q8TB92 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLL1Q8TB92 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLL1Q8TB92 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLL1Q8TB92 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLL1Q8TB92 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HMGCLL1Q8TB92 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.33■■□□□ 1.01
HMGCLL1Q8TB92 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
HMGCLL1Q8TB92 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.33■■□□□ 1.01
HMGCLL1Q8TB92 MIR638-201ENST00000385237 100 ntBASIC21.33■■□□□ 1.01
HMGCLL1Q8TB92 BX842568.3-201ENST00000418104 571 ntBASIC21.33■■□□□ 1.01
HMGCLL1Q8TB92 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
HMGCLL1Q8TB92 AL355001.2-201ENST00000620617 1191 ntBASIC21.33■■□□□ 1.01
HMGCLL1Q8TB92 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.33■■□□□ 1.01
HMGCLL1Q8TB92 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.33■■□□□ 1
HMGCLL1Q8TB92 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.33■■□□□ 1
HMGCLL1Q8TB92 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.33■■□□□ 1
HMGCLL1Q8TB92 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.33■■□□□ 1
HMGCLL1Q8TB92 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.33■■□□□ 1
HMGCLL1Q8TB92 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.32■■□□□ 1
HMGCLL1Q8TB92 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
HMGCLL1Q8TB92 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HMGCLL1Q8TB92 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.32■■□□□ 1
HMGCLL1Q8TB92 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HMGCLL1Q8TB92 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HMGCLL1Q8TB92 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.32■■□□□ 1
HMGCLL1Q8TB92 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HMGCLL1Q8TB92 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
HMGCLL1Q8TB92 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.32■■□□□ 1
HMGCLL1Q8TB92 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.32■■□□□ 1
HMGCLL1Q8TB92 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HMGCLL1Q8TB92 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
HMGCLL1Q8TB92 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HMGCLL1Q8TB92 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HMGCLL1Q8TB92 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HMGCLL1Q8TB92 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HMGCLL1Q8TB92 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HMGCLL1Q8TB92 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.31■■□□□ 1
HMGCLL1Q8TB92 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HMGCLL1Q8TB92 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.31■■□□□ 1
HMGCLL1Q8TB92 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HMGCLL1Q8TB92 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HMGCLL1Q8TB92 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HMGCLL1Q8TB92 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.31■■□□□ 1
HMGCLL1Q8TB92 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 SUDS3P1-201ENST00000505831 966 ntBASIC21.3■■□□□ 1
HMGCLL1Q8TB92 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.3■■□□□ 1
HMGCLL1Q8TB92 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HMGCLL1Q8TB92 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMGCLL1Q8TB92 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLL1Q8TB92 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLL1Q8TB92 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLL1Q8TB92 MIR939-201ENST00000401314 82 ntBASIC21.29■■□□□ 1
HMGCLL1Q8TB92 SLC47A1P1-202ENST00000449666 945 ntBASIC21.29■■□□□ 1
HMGCLL1Q8TB92 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.29■■□□□ 1
HMGCLL1Q8TB92 AP001330.3-201ENST00000520123 633 ntBASIC21.29■■□□□ 1
HMGCLL1Q8TB92 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.29■■□□□ 1
HMGCLL1Q8TB92 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.29■■□□□ 1
HMGCLL1Q8TB92 AC233992.3-201ENST00000607491 485 ntBASIC21.29■■□□□ 1
HMGCLL1Q8TB92 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLL1Q8TB92 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLL1Q8TB92 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLL1Q8TB92 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HMGCLL1Q8TB92 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMGCLL1Q8TB92 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HMGCLL1Q8TB92 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
HMGCLL1Q8TB92 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMGCLL1Q8TB92 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.28■■□□□ 1
HMGCLL1Q8TB92 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.28■■□□□ 1
HMGCLL1Q8TB92 AC027682.1-201ENST00000562846 899 ntBASIC21.28■■□□□ 1
HMGCLL1Q8TB92 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMGCLL1Q8TB92 AC005837.3-201ENST00000612163 286 ntBASIC21.28■■□□□ 1
HMGCLL1Q8TB92 AL031602.1-201ENST00000633169 911 ntBASIC21.28■■□□□ 1
HMGCLL1Q8TB92 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCLL1Q8TB92 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HMGCLL1Q8TB92 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
HMGCLL1Q8TB92 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HMGCLL1Q8TB92 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.28■■□□□ 1
HMGCLL1Q8TB92 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.27■■□□□ 1
HMGCLL1Q8TB92 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HMGCLL1Q8TB92 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms