Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
CFAP43Q8NDM7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC34.3■■■■□ 3.08
CFAP43Q8NDM7 AC068587.7-201ENST00000641602 218 ntBASIC34.3■■■■□ 3.08
CFAP43Q8NDM7 AC008687.6-201ENST00000596318 630 ntBASIC34.29■■■■□ 3.08
CFAP43Q8NDM7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC34.29■■■■□ 3.08
CFAP43Q8NDM7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
CFAP43Q8NDM7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
CFAP43Q8NDM7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
CFAP43Q8NDM7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC34.28■■■■□ 3.08
CFAP43Q8NDM7 DUX4L16-201ENST00000555130 1264 ntBASIC34.28■■■■□ 3.08
CFAP43Q8NDM7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC34.28■■■■□ 3.08
CFAP43Q8NDM7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
CFAP43Q8NDM7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC34.28■■■■□ 3.08
CFAP43Q8NDM7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC34.28■■■■□ 3.08
CFAP43Q8NDM7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC34.28■■■■□ 3.08
CFAP43Q8NDM7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC34.28■■■■□ 3.08
CFAP43Q8NDM7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC34.28■■■■□ 3.08
CFAP43Q8NDM7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
CFAP43Q8NDM7 TESC-206ENST00000541210 936 ntTSL 3 BASIC34.28■■■■□ 3.08
CFAP43Q8NDM7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC34.28■■■■□ 3.08
CFAP43Q8NDM7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
CFAP43Q8NDM7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC34.27■■■■□ 3.08
CFAP43Q8NDM7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
CFAP43Q8NDM7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CFAP43Q8NDM7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC34.27■■■■□ 3.08
CFAP43Q8NDM7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CFAP43Q8NDM7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
CFAP43Q8NDM7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC34.26■■■■□ 3.08
CFAP43Q8NDM7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
CFAP43Q8NDM7 SLC29A4P1-201ENST00000398760 971 ntBASIC34.26■■■■□ 3.08
CFAP43Q8NDM7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC34.26■■■■□ 3.08
CFAP43Q8NDM7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC34.26■■■■□ 3.08
CFAP43Q8NDM7 DUSP8P3-201ENST00000399571 1760 ntBASIC34.26■■■■□ 3.08
CFAP43Q8NDM7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
CFAP43Q8NDM7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
CFAP43Q8NDM7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
CFAP43Q8NDM7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CFAP43Q8NDM7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CFAP43Q8NDM7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC34.25■■■■□ 3.07
CFAP43Q8NDM7 AC087239.1-201ENST00000622671 572 ntBASIC34.25■■■■□ 3.07
CFAP43Q8NDM7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CFAP43Q8NDM7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC34.25■■■■□ 3.07
CFAP43Q8NDM7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CFAP43Q8NDM7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC34.25■■■■□ 3.07
CFAP43Q8NDM7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC34.25■■■■□ 3.07
CFAP43Q8NDM7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CFAP43Q8NDM7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CFAP43Q8NDM7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC34.24■■■■□ 3.07
CFAP43Q8NDM7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC34.24■■■■□ 3.07
CFAP43Q8NDM7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
CFAP43Q8NDM7 AC083906.2-201ENST00000511578 360 ntBASIC34.24■■■■□ 3.07
CFAP43Q8NDM7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC34.24■■■■□ 3.07
CFAP43Q8NDM7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CFAP43Q8NDM7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
CFAP43Q8NDM7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC34.23■■■■□ 3.07
CFAP43Q8NDM7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC34.23■■■■□ 3.07
CFAP43Q8NDM7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
CFAP43Q8NDM7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC34.23■■■■□ 3.07
CFAP43Q8NDM7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
CFAP43Q8NDM7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC34.23■■■■□ 3.07
CFAP43Q8NDM7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC34.23■■■■□ 3.07
CFAP43Q8NDM7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
CFAP43Q8NDM7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC34.23■■■■□ 3.07
CFAP43Q8NDM7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC34.23■■■■□ 3.07
CFAP43Q8NDM7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC34.23■■■■□ 3.07
CFAP43Q8NDM7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC34.22■■■■□ 3.07
CFAP43Q8NDM7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
CFAP43Q8NDM7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
CFAP43Q8NDM7 AC093323.1-202ENST00000635031 2045 ntBASIC34.22■■■■□ 3.07
CFAP43Q8NDM7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
CFAP43Q8NDM7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
CFAP43Q8NDM7 UBE2DNL-204ENST00000602536 740 ntBASIC34.22■■■■□ 3.07
CFAP43Q8NDM7 ITM2C-210ENST00000620962 501 ntBASIC34.22■■■■□ 3.07
CFAP43Q8NDM7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC34.21■■■■□ 3.07
CFAP43Q8NDM7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
CFAP43Q8NDM7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
CFAP43Q8NDM7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
CFAP43Q8NDM7 AC073210.2-201ENST00000430369 194 ntBASIC34.21■■■■□ 3.07
CFAP43Q8NDM7 FAM201B-201ENST00000458407 597 ntBASIC34.21■■■■□ 3.07
CFAP43Q8NDM7 SMUG1P1-201ENST00000590640 811 ntBASIC34.21■■■■□ 3.07
CFAP43Q8NDM7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC34.2■■■■□ 3.07
CFAP43Q8NDM7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC34.2■■■■□ 3.07
CFAP43Q8NDM7 AC010141.3-201ENST00000456659 717 ntBASIC34.2■■■■□ 3.07
CFAP43Q8NDM7 AC005181.1-201ENST00000604782 1256 ntBASIC34.2■■■■□ 3.07
CFAP43Q8NDM7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
CFAP43Q8NDM7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC34.2■■■■□ 3.07
CFAP43Q8NDM7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
CFAP43Q8NDM7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC34.19■■■■□ 3.06
CFAP43Q8NDM7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
CFAP43Q8NDM7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
CFAP43Q8NDM7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC34.19■■■■□ 3.06
CFAP43Q8NDM7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC34.19■■■■□ 3.06
CFAP43Q8NDM7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC34.19■■■■□ 3.06
CFAP43Q8NDM7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC34.19■■■■□ 3.06
CFAP43Q8NDM7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
CFAP43Q8NDM7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC34.19■■■■□ 3.06
CFAP43Q8NDM7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC34.19■■■■□ 3.06
CFAP43Q8NDM7 AC079140.4-201ENST00000507448 529 ntBASIC34.19■■■■□ 3.06
CFAP43Q8NDM7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC34.19■■■■□ 3.06
CFAP43Q8NDM7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC34.19■■■■□ 3.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms