Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC168Q8NDH2 AC004687.1-201ENST00000579003 1625 ntBASIC18.35■□□□□ 0.53
CCDC168Q8NDH2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC168Q8NDH2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC168Q8NDH2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC168Q8NDH2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC168Q8NDH2 MIR718-201ENST00000390190 70 ntBASIC18.34■□□□□ 0.53
CCDC168Q8NDH2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC168Q8NDH2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC168Q8NDH2 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.34■□□□□ 0.53
CCDC168Q8NDH2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC168Q8NDH2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CCDC168Q8NDH2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC168Q8NDH2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC168Q8NDH2 AC073648.6-201ENST00000641589 218 ntBASIC18.34■□□□□ 0.53
CCDC168Q8NDH2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC168Q8NDH2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC168Q8NDH2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC168Q8NDH2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CCDC168Q8NDH2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC168Q8NDH2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC168Q8NDH2 AC005224.4-201ENST00000583262 1652 ntBASIC18.33■□□□□ 0.53
CCDC168Q8NDH2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC168Q8NDH2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC168Q8NDH2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC168Q8NDH2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CCDC168Q8NDH2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC168Q8NDH2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC168Q8NDH2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC168Q8NDH2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC168Q8NDH2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC168Q8NDH2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 MIR4497-201ENST00000583208 89 ntBASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 AC016405.3-201ENST00000607710 860 ntBASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 AC068338.2-201ENST00000563278 1430 ntBASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 LINC01023-201ENST00000606054 436 ntBASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC168Q8NDH2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC168Q8NDH2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC168Q8NDH2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC168Q8NDH2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC168Q8NDH2 AC008694.1-202ENST00000636953 945 ntBASIC18.3■□□□□ 0.52
CCDC168Q8NDH2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC168Q8NDH2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC168Q8NDH2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC168Q8NDH2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC168Q8NDH2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC168Q8NDH2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCDC168Q8NDH2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC168Q8NDH2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC168Q8NDH2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC168Q8NDH2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC168Q8NDH2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC168Q8NDH2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC168Q8NDH2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC168Q8NDH2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC168Q8NDH2 BX276092.2-201ENST00000417668 665 ntBASIC18.29■□□□□ 0.52
CCDC168Q8NDH2 CYP2T1P-201ENST00000432607 1285 ntBASIC18.29■□□□□ 0.52
CCDC168Q8NDH2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC168Q8NDH2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC168Q8NDH2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC168Q8NDH2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC168Q8NDH2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC168Q8NDH2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC168Q8NDH2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms