Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BEST3Q8N1M1 SMUG1P1-201ENST00000590640 811 ntBASIC20.1■□□□□ 0.81
BEST3Q8N1M1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.1■□□□□ 0.81
BEST3Q8N1M1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BEST3Q8N1M1 DUSP8P3-201ENST00000399571 1760 ntBASIC20.1■□□□□ 0.81
BEST3Q8N1M1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST3Q8N1M1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BEST3Q8N1M1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
BEST3Q8N1M1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 OXCT2P1-201ENST00000447263 1535 ntBASIC20.09■□□□□ 0.81
BEST3Q8N1M1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.09■□□□□ 0.81
BEST3Q8N1M1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 TPRG1LP1-201ENST00000598702 760 ntBASIC20.09■□□□□ 0.81
BEST3Q8N1M1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BEST3Q8N1M1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
BEST3Q8N1M1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BEST3Q8N1M1 BX005040.4-201ENST00000637145 1518 ntBASIC20.08■□□□□ 0.81
BEST3Q8N1M1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.08■□□□□ 0.81
BEST3Q8N1M1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BEST3Q8N1M1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BEST3Q8N1M1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BEST3Q8N1M1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BEST3Q8N1M1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
BEST3Q8N1M1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
BEST3Q8N1M1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BEST3Q8N1M1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.08■□□□□ 0.81
BEST3Q8N1M1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.08■□□□□ 0.81
BEST3Q8N1M1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BEST3Q8N1M1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.08■□□□□ 0.81
BEST3Q8N1M1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
BEST3Q8N1M1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BEST3Q8N1M1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
BEST3Q8N1M1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
BEST3Q8N1M1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BEST3Q8N1M1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
BEST3Q8N1M1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BEST3Q8N1M1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
BEST3Q8N1M1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.07■□□□□ 0.8
BEST3Q8N1M1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST3Q8N1M1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST3Q8N1M1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
BEST3Q8N1M1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.07■□□□□ 0.8
BEST3Q8N1M1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST3Q8N1M1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BEST3Q8N1M1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BEST3Q8N1M1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BEST3Q8N1M1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.05■□□□□ 0.8
BEST3Q8N1M1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
BEST3Q8N1M1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST3Q8N1M1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST3Q8N1M1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
BEST3Q8N1M1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.05■□□□□ 0.8
BEST3Q8N1M1 AL137784.2-201ENST00000607332 1000 ntBASIC20.05■□□□□ 0.8
BEST3Q8N1M1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST3Q8N1M1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST3Q8N1M1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BEST3Q8N1M1 CLDN5-201ENST00000403084 2357 ntBASIC20.05■□□□□ 0.8
BEST3Q8N1M1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
BEST3Q8N1M1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST3Q8N1M1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST3Q8N1M1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST3Q8N1M1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
BEST3Q8N1M1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST3Q8N1M1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST3Q8N1M1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST3Q8N1M1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST3Q8N1M1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BEST3Q8N1M1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.04■□□□□ 0.8
BEST3Q8N1M1 AC092437.1-201ENST00000624794 1048 ntBASIC20.04■□□□□ 0.8
BEST3Q8N1M1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST3Q8N1M1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BEST3Q8N1M1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BEST3Q8N1M1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms