Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
ABCA6Q8N139 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
ABCA6Q8N139 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
ABCA6Q8N139 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
ABCA6Q8N139 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
ABCA6Q8N139 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
ABCA6Q8N139 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
ABCA6Q8N139 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
ABCA6Q8N139 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC32.62■■■□□ 2.81
ABCA6Q8N139 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
ABCA6Q8N139 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
ABCA6Q8N139 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
ABCA6Q8N139 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
ABCA6Q8N139 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
ABCA6Q8N139 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
ABCA6Q8N139 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
ABCA6Q8N139 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
ABCA6Q8N139 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC32.61■■■□□ 2.81
ABCA6Q8N139 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
ABCA6Q8N139 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC32.61■■■□□ 2.81
ABCA6Q8N139 AC013268.1-206ENST00000638368 961 ntBASIC32.61■■■□□ 2.81
ABCA6Q8N139 AC112229.1-201ENST00000639295 961 ntBASIC32.61■■■□□ 2.81
ABCA6Q8N139 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC32.6■■■□□ 2.81
ABCA6Q8N139 USP45-205ENST00000472914 1617 ntTSL 5 BASIC32.6■■■□□ 2.81
ABCA6Q8N139 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC32.6■■■□□ 2.81
ABCA6Q8N139 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
ABCA6Q8N139 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC32.6■■■□□ 2.81
ABCA6Q8N139 AC138932.3-201ENST00000567634 1902 ntBASIC32.6■■■□□ 2.81
ABCA6Q8N139 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
ABCA6Q8N139 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
ABCA6Q8N139 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
ABCA6Q8N139 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
ABCA6Q8N139 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
ABCA6Q8N139 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
ABCA6Q8N139 AC055733.4-201ENST00000638462 1354 ntBASIC32.59■■■□□ 2.81
ABCA6Q8N139 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC32.59■■■□□ 2.81
ABCA6Q8N139 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC32.59■■■□□ 2.81
ABCA6Q8N139 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
ABCA6Q8N139 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
ABCA6Q8N139 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
ABCA6Q8N139 DUSP8P5-201ENST00000422884 1815 ntBASIC32.59■■■□□ 2.81
ABCA6Q8N139 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC32.59■■■□□ 2.81
ABCA6Q8N139 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
ABCA6Q8N139 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
ABCA6Q8N139 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC32.59■■■□□ 2.81
ABCA6Q8N139 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
ABCA6Q8N139 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
ABCA6Q8N139 LINC00543-201ENST00000567234 1845 ntBASIC32.58■■■□□ 2.81
ABCA6Q8N139 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
ABCA6Q8N139 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC32.58■■■□□ 2.81
ABCA6Q8N139 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC32.58■■■□□ 2.81
ABCA6Q8N139 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
ABCA6Q8N139 AC138907.5-202ENST00000569484 235 ntBASIC32.58■■■□□ 2.81
ABCA6Q8N139 DUSP8P3-201ENST00000399571 1760 ntBASIC32.58■■■□□ 2.81
ABCA6Q8N139 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
ABCA6Q8N139 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
ABCA6Q8N139 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
ABCA6Q8N139 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC32.57■■■□□ 2.8
ABCA6Q8N139 PPP1R14BP2-201ENST00000426284 444 ntBASIC32.57■■■□□ 2.8
ABCA6Q8N139 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC32.57■■■□□ 2.8
ABCA6Q8N139 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
ABCA6Q8N139 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC32.57■■■□□ 2.8
ABCA6Q8N139 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
ABCA6Q8N139 H19-210ENST00000439725 1929 ntTSL 2 BASIC32.56■■■□□ 2.8
ABCA6Q8N139 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC32.56■■■□□ 2.8
ABCA6Q8N139 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
ABCA6Q8N139 KRT18P29-201ENST00000397031 1267 ntBASIC32.56■■■□□ 2.8
ABCA6Q8N139 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
ABCA6Q8N139 ARL16-209ENST00000573715 763 ntTSL 3 BASIC32.56■■■□□ 2.8
ABCA6Q8N139 ARL16-211ENST00000576135 694 ntTSL 3 BASIC32.56■■■□□ 2.8
ABCA6Q8N139 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
ABCA6Q8N139 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC32.55■■■□□ 2.8
ABCA6Q8N139 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC32.55■■■□□ 2.8
ABCA6Q8N139 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
ABCA6Q8N139 AL353803.4-201ENST00000565882 1934 ntBASIC32.55■■■□□ 2.8
ABCA6Q8N139 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC32.55■■■□□ 2.8
ABCA6Q8N139 AC007322.4-201ENST00000509611 723 ntBASIC32.55■■■□□ 2.8
ABCA6Q8N139 AC068338.2-201ENST00000563278 1430 ntBASIC32.55■■■□□ 2.8
ABCA6Q8N139 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
ABCA6Q8N139 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
ABCA6Q8N139 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
ABCA6Q8N139 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
ABCA6Q8N139 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
ABCA6Q8N139 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC32.54■■■□□ 2.8
ABCA6Q8N139 GCSHP5-201ENST00000443090 522 ntBASIC32.54■■■□□ 2.8
ABCA6Q8N139 KRT18P20-201ENST00000548986 1279 ntBASIC32.54■■■□□ 2.8
ABCA6Q8N139 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC32.54■■■□□ 2.8
ABCA6Q8N139 MKRN4P-201ENST00000444706 1521 ntBASIC32.54■■■□□ 2.8
ABCA6Q8N139 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
ABCA6Q8N139 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
ABCA6Q8N139 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC32.53■■■□□ 2.8
ABCA6Q8N139 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
ABCA6Q8N139 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
ABCA6Q8N139 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
ABCA6Q8N139 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC32.53■■■□□ 2.8
ABCA6Q8N139 EED-207ENST00000528180 1745 ntTSL 5 BASIC32.53■■■□□ 2.8
ABCA6Q8N139 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
ABCA6Q8N139 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
ABCA6Q8N139 MIPEPP3-201ENST00000412105 444 ntBASIC32.52■■■□□ 2.8
ABCA6Q8N139 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms