Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
UBR1Q8IWV7 KRT18P20-201ENST00000548986 1279 ntBASIC31.37■■■□□ 2.61
UBR1Q8IWV7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
UBR1Q8IWV7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
UBR1Q8IWV7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
UBR1Q8IWV7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC31.37■■■□□ 2.61
UBR1Q8IWV7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
UBR1Q8IWV7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC31.36■■■□□ 2.61
UBR1Q8IWV7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
UBR1Q8IWV7 AC138907.5-202ENST00000569484 235 ntBASIC31.36■■■□□ 2.61
UBR1Q8IWV7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
UBR1Q8IWV7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
UBR1Q8IWV7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
UBR1Q8IWV7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
UBR1Q8IWV7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC31.36■■■□□ 2.61
UBR1Q8IWV7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
UBR1Q8IWV7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
UBR1Q8IWV7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC31.36■■■□□ 2.61
UBR1Q8IWV7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
UBR1Q8IWV7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
UBR1Q8IWV7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
UBR1Q8IWV7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC31.35■■■□□ 2.61
UBR1Q8IWV7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC31.35■■■□□ 2.61
UBR1Q8IWV7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
UBR1Q8IWV7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
UBR1Q8IWV7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
UBR1Q8IWV7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
UBR1Q8IWV7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC31.35■■■□□ 2.61
UBR1Q8IWV7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC31.35■■■□□ 2.61
UBR1Q8IWV7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
UBR1Q8IWV7 AC055733.4-201ENST00000638462 1354 ntBASIC31.34■■■□□ 2.61
UBR1Q8IWV7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
UBR1Q8IWV7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
UBR1Q8IWV7 PPP1R14BP2-201ENST00000426284 444 ntBASIC31.34■■■□□ 2.61
UBR1Q8IWV7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
UBR1Q8IWV7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC31.33■■■□□ 2.61
UBR1Q8IWV7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC31.33■■■□□ 2.61
UBR1Q8IWV7 AC007322.4-201ENST00000509611 723 ntBASIC31.33■■■□□ 2.61
UBR1Q8IWV7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
UBR1Q8IWV7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
UBR1Q8IWV7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
UBR1Q8IWV7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
UBR1Q8IWV7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.61
UBR1Q8IWV7 DUSP8P3-201ENST00000399571 1760 ntBASIC31.32■■■□□ 2.61
UBR1Q8IWV7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC31.32■■■□□ 2.61
UBR1Q8IWV7 LINC00543-201ENST00000567234 1845 ntBASIC31.32■■■□□ 2.6
UBR1Q8IWV7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
UBR1Q8IWV7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
UBR1Q8IWV7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
UBR1Q8IWV7 AC068338.2-201ENST00000563278 1430 ntBASIC31.32■■■□□ 2.6
UBR1Q8IWV7 DUSP8P5-201ENST00000422884 1815 ntBASIC31.32■■■□□ 2.6
UBR1Q8IWV7 MKRN4P-201ENST00000444706 1521 ntBASIC31.32■■■□□ 2.6
UBR1Q8IWV7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
UBR1Q8IWV7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
UBR1Q8IWV7 KRT18P29-201ENST00000397031 1267 ntBASIC31.32■■■□□ 2.6
UBR1Q8IWV7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
UBR1Q8IWV7 AC138932.3-201ENST00000567634 1902 ntBASIC31.32■■■□□ 2.6
UBR1Q8IWV7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
UBR1Q8IWV7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
UBR1Q8IWV7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC31.31■■■□□ 2.6
UBR1Q8IWV7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC31.31■■■□□ 2.6
UBR1Q8IWV7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
UBR1Q8IWV7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
UBR1Q8IWV7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC31.3■■■□□ 2.6
UBR1Q8IWV7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 GCSHP5-201ENST00000443090 522 ntBASIC31.29■■■□□ 2.6
UBR1Q8IWV7 MIR4758-201ENST00000577688 71 ntBASIC31.29■■■□□ 2.6
UBR1Q8IWV7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 EED-207ENST00000528180 1745 ntTSL 5 BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 H19-210ENST00000439725 1929 ntTSL 2 BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 AL353803.4-201ENST00000565882 1934 ntBASIC31.29■■■□□ 2.6
UBR1Q8IWV7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
UBR1Q8IWV7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
UBR1Q8IWV7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
UBR1Q8IWV7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
UBR1Q8IWV7 MIPEPP3-201ENST00000412105 444 ntBASIC31.28■■■□□ 2.6
UBR1Q8IWV7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC31.28■■■□□ 2.6
UBR1Q8IWV7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC31.28■■■□□ 2.6
UBR1Q8IWV7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
UBR1Q8IWV7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
UBR1Q8IWV7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
UBR1Q8IWV7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
UBR1Q8IWV7 AC092118.2-201ENST00000613495 667 ntBASIC31.27■■■□□ 2.6
UBR1Q8IWV7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
UBR1Q8IWV7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC31.27■■■□□ 2.6
UBR1Q8IWV7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
UBR1Q8IWV7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
UBR1Q8IWV7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
UBR1Q8IWV7 ADM-205ENST00000528544 586 ntTSL 2 BASIC31.26■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms