Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
SFTPA1Q8IWL2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SFTPA1Q8IWL2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
SFTPA1Q8IWL2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.08■■□□□ 1.13
SFTPA1Q8IWL2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
SFTPA1Q8IWL2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SFTPA1Q8IWL2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.08■■□□□ 1.13
SFTPA1Q8IWL2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.08■■□□□ 1.13
SFTPA1Q8IWL2 AC104187.1-201ENST00000607510 612 ntBASIC22.08■■□□□ 1.13
SFTPA1Q8IWL2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.08■■□□□ 1.12
SFTPA1Q8IWL2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
SFTPA1Q8IWL2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SFTPA1Q8IWL2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.07■■□□□ 1.12
SFTPA1Q8IWL2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SFTPA1Q8IWL2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.07■■□□□ 1.12
SFTPA1Q8IWL2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SFTPA1Q8IWL2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SFTPA1Q8IWL2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SFTPA1Q8IWL2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.07■■□□□ 1.12
SFTPA1Q8IWL2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.06■■□□□ 1.12
SFTPA1Q8IWL2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
SFTPA1Q8IWL2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
SFTPA1Q8IWL2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.06■■□□□ 1.12
SFTPA1Q8IWL2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.06■■□□□ 1.12
SFTPA1Q8IWL2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.06■■□□□ 1.12
SFTPA1Q8IWL2 AC104771.1-201ENST00000603335 964 ntBASIC22.06■■□□□ 1.12
SFTPA1Q8IWL2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
SFTPA1Q8IWL2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.06■■□□□ 1.12
SFTPA1Q8IWL2 LINC01960-201ENST00000563759 1884 ntBASIC22.06■■□□□ 1.12
SFTPA1Q8IWL2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SFTPA1Q8IWL2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SFTPA1Q8IWL2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
SFTPA1Q8IWL2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SFTPA1Q8IWL2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
SFTPA1Q8IWL2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.05■■□□□ 1.12
SFTPA1Q8IWL2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SFTPA1Q8IWL2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SFTPA1Q8IWL2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SFTPA1Q8IWL2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.05■■□□□ 1.12
SFTPA1Q8IWL2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SFTPA1Q8IWL2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SFTPA1Q8IWL2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SFTPA1Q8IWL2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.05■■□□□ 1.12
SFTPA1Q8IWL2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.05■■□□□ 1.12
SFTPA1Q8IWL2 MFSD11-216ENST00000590393 1141 ntBASIC22.05■■□□□ 1.12
SFTPA1Q8IWL2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
SFTPA1Q8IWL2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.04■■□□□ 1.12
SFTPA1Q8IWL2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SFTPA1Q8IWL2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SFTPA1Q8IWL2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.04■■□□□ 1.12
SFTPA1Q8IWL2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.04■■□□□ 1.12
SFTPA1Q8IWL2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.04■■□□□ 1.12
SFTPA1Q8IWL2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.04■■□□□ 1.12
SFTPA1Q8IWL2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SFTPA1Q8IWL2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SFTPA1Q8IWL2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SFTPA1Q8IWL2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.04■■□□□ 1.12
SFTPA1Q8IWL2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.04■■□□□ 1.12
SFTPA1Q8IWL2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SFTPA1Q8IWL2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SFTPA1Q8IWL2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SFTPA1Q8IWL2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.03■■□□□ 1.12
SFTPA1Q8IWL2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.03■■□□□ 1.12
SFTPA1Q8IWL2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.03■■□□□ 1.12
SFTPA1Q8IWL2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.03■■□□□ 1.12
SFTPA1Q8IWL2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.03■■□□□ 1.12
SFTPA1Q8IWL2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SFTPA1Q8IWL2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SFTPA1Q8IWL2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SFTPA1Q8IWL2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.03■■□□□ 1.12
SFTPA1Q8IWL2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SFTPA1Q8IWL2 KRT87P-202ENST00000534226 1464 ntBASIC22.03■■□□□ 1.12
SFTPA1Q8IWL2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SFTPA1Q8IWL2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SFTPA1Q8IWL2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SFTPA1Q8IWL2 MIR663A-201ENST00000385250 93 ntBASIC22.02■■□□□ 1.12
SFTPA1Q8IWL2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SFTPA1Q8IWL2 AC006970.2-201ENST00000450065 779 ntBASIC22.02■■□□□ 1.12
SFTPA1Q8IWL2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.02■■□□□ 1.12
SFTPA1Q8IWL2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
SFTPA1Q8IWL2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
SFTPA1Q8IWL2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.01■■□□□ 1.11
SFTPA1Q8IWL2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.01■■□□□ 1.11
SFTPA1Q8IWL2 AC009237.3-201ENST00000393279 1427 ntBASIC22.01■■□□□ 1.11
SFTPA1Q8IWL2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.01■■□□□ 1.11
SFTPA1Q8IWL2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SFTPA1Q8IWL2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SFTPA1Q8IWL2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.01■■□□□ 1.11
SFTPA1Q8IWL2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.01■■□□□ 1.11
SFTPA1Q8IWL2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SFTPA1Q8IWL2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.01■■□□□ 1.11
SFTPA1Q8IWL2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.01■■□□□ 1.11
SFTPA1Q8IWL2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SFTPA1Q8IWL2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SFTPA1Q8IWL2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22■■□□□ 1.11
SFTPA1Q8IWL2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22■■□□□ 1.11
SFTPA1Q8IWL2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22■■□□□ 1.11
SFTPA1Q8IWL2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
SFTPA1Q8IWL2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SFTPA1Q8IWL2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms