Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.97■■□□□ 1.27
RNF135Q8IUD6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.97■■□□□ 1.27
RNF135Q8IUD6 AC008687.6-201ENST00000596318 630 ntBASIC22.97■■□□□ 1.27
RNF135Q8IUD6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF135Q8IUD6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.97■■□□□ 1.27
RNF135Q8IUD6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
RNF135Q8IUD6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF135Q8IUD6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF135Q8IUD6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF135Q8IUD6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF135Q8IUD6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF135Q8IUD6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF135Q8IUD6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF135Q8IUD6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF135Q8IUD6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF135Q8IUD6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF135Q8IUD6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF135Q8IUD6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF135Q8IUD6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.95■■□□□ 1.26
RNF135Q8IUD6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RNF135Q8IUD6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
RNF135Q8IUD6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RNF135Q8IUD6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
RNF135Q8IUD6 AL138781.1-201ENST00000566567 1274 ntBASIC22.95■■□□□ 1.26
RNF135Q8IUD6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
RNF135Q8IUD6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.94■■□□□ 1.26
RNF135Q8IUD6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF135Q8IUD6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RNF135Q8IUD6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RNF135Q8IUD6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
RNF135Q8IUD6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RNF135Q8IUD6 GUSBP6-202ENST00000438529 1198 ntBASIC22.94■■□□□ 1.26
RNF135Q8IUD6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.94■■□□□ 1.26
RNF135Q8IUD6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.94■■□□□ 1.26
RNF135Q8IUD6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.94■■□□□ 1.26
RNF135Q8IUD6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
RNF135Q8IUD6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RNF135Q8IUD6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.94■■□□□ 1.26
RNF135Q8IUD6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.94■■□□□ 1.26
RNF135Q8IUD6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF135Q8IUD6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF135Q8IUD6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RNF135Q8IUD6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF135Q8IUD6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF135Q8IUD6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF135Q8IUD6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
RNF135Q8IUD6 SLC7A5P2-201ENST00000553010 536 ntBASIC22.93■■□□□ 1.26
RNF135Q8IUD6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.93■■□□□ 1.26
RNF135Q8IUD6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.93■■□□□ 1.26
RNF135Q8IUD6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.93■■□□□ 1.26
RNF135Q8IUD6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.93■■□□□ 1.26
RNF135Q8IUD6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.93■■□□□ 1.26
RNF135Q8IUD6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.93■■□□□ 1.26
RNF135Q8IUD6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RNF135Q8IUD6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 BX005040.4-201ENST00000637145 1518 ntBASIC22.92■■□□□ 1.26
RNF135Q8IUD6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 AC069152.1-201ENST00000438030 544 ntBASIC22.92■■□□□ 1.26
RNF135Q8IUD6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 MFSD11-216ENST00000590393 1141 ntBASIC22.92■■□□□ 1.26
RNF135Q8IUD6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RNF135Q8IUD6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF135Q8IUD6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF135Q8IUD6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.91■■□□□ 1.26
RNF135Q8IUD6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
RNF135Q8IUD6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RNF135Q8IUD6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF135Q8IUD6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF135Q8IUD6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.91■■□□□ 1.26
RNF135Q8IUD6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.91■■□□□ 1.26
RNF135Q8IUD6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF135Q8IUD6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RNF135Q8IUD6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF135Q8IUD6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
RNF135Q8IUD6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.91■■□□□ 1.26
RNF135Q8IUD6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RNF135Q8IUD6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
RNF135Q8IUD6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
RNF135Q8IUD6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.9■■□□□ 1.26
RNF135Q8IUD6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RNF135Q8IUD6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
RNF135Q8IUD6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.9■■□□□ 1.26
RNF135Q8IUD6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.9■■□□□ 1.26
RNF135Q8IUD6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.9■■□□□ 1.26
RNF135Q8IUD6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.9■■□□□ 1.26
RNF135Q8IUD6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms