Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX53Q86TM3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX53Q86TM3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX53Q86TM3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX53Q86TM3 MIR663A-201ENST00000385250 93 ntBASIC23.13■■□□□ 1.29
DDX53Q86TM3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX53Q86TM3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DDX53Q86TM3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
DDX53Q86TM3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DDX53Q86TM3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DDX53Q86TM3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.12■■□□□ 1.29
DDX53Q86TM3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX53Q86TM3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.12■■□□□ 1.29
DDX53Q86TM3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX53Q86TM3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.11■■□□□ 1.29
DDX53Q86TM3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX53Q86TM3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.11■■□□□ 1.29
DDX53Q86TM3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX53Q86TM3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX53Q86TM3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX53Q86TM3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX53Q86TM3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
DDX53Q86TM3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
DDX53Q86TM3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX53Q86TM3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
DDX53Q86TM3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.1■■□□□ 1.29
DDX53Q86TM3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.1■■□□□ 1.29
DDX53Q86TM3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
DDX53Q86TM3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX53Q86TM3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
DDX53Q86TM3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.1■■□□□ 1.29
DDX53Q86TM3 GPX1P1-201ENST00000388829 606 ntBASIC23.1■■□□□ 1.29
DDX53Q86TM3 AL355802.2-201ENST00000402069 882 ntBASIC23.1■■□□□ 1.29
DDX53Q86TM3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.1■■□□□ 1.29
DDX53Q86TM3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.1■■□□□ 1.29
DDX53Q86TM3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
DDX53Q86TM3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
DDX53Q86TM3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
DDX53Q86TM3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX53Q86TM3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX53Q86TM3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.1■■□□□ 1.29
DDX53Q86TM3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX53Q86TM3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.09■■□□□ 1.29
DDX53Q86TM3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX53Q86TM3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX53Q86TM3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX53Q86TM3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX53Q86TM3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
DDX53Q86TM3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.09■■□□□ 1.29
DDX53Q86TM3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.09■■□□□ 1.29
DDX53Q86TM3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.09■■□□□ 1.29
DDX53Q86TM3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.09■■□□□ 1.29
DDX53Q86TM3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.09■■□□□ 1.29
DDX53Q86TM3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.09■■□□□ 1.29
DDX53Q86TM3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.09■■□□□ 1.29
DDX53Q86TM3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DDX53Q86TM3 ANOS2P-203ENST00000472227 1816 ntBASIC23.09■■□□□ 1.29
DDX53Q86TM3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX53Q86TM3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.09■■□□□ 1.29
DDX53Q86TM3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DDX53Q86TM3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX53Q86TM3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX53Q86TM3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX53Q86TM3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.08■■□□□ 1.29
DDX53Q86TM3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.08■■□□□ 1.29
DDX53Q86TM3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX53Q86TM3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
DDX53Q86TM3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
DDX53Q86TM3 AC092068.2-201ENST00000590491 1708 ntBASIC23.08■■□□□ 1.28
DDX53Q86TM3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.07■■□□□ 1.28
DDX53Q86TM3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX53Q86TM3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
DDX53Q86TM3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX53Q86TM3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX53Q86TM3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
DDX53Q86TM3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
DDX53Q86TM3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX53Q86TM3 AC231657.2-201ENST00000624556 255 ntBASIC23.07■■□□□ 1.28
DDX53Q86TM3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.07■■□□□ 1.28
DDX53Q86TM3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.07■■□□□ 1.28
DDX53Q86TM3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.07■■□□□ 1.28
DDX53Q86TM3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
DDX53Q86TM3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX53Q86TM3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX53Q86TM3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX53Q86TM3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX53Q86TM3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX53Q86TM3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.06■■□□□ 1.28
DDX53Q86TM3 AC055733.4-201ENST00000638462 1354 ntBASIC23.06■■□□□ 1.28
DDX53Q86TM3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX53Q86TM3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.06■■□□□ 1.28
DDX53Q86TM3 AC079089.2-201ENST00000531211 1277 ntBASIC23.06■■□□□ 1.28
DDX53Q86TM3 DUX4L16-201ENST00000555130 1264 ntBASIC23.06■■□□□ 1.28
DDX53Q86TM3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.06■■□□□ 1.28
DDX53Q86TM3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX53Q86TM3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.06■■□□□ 1.28
DDX53Q86TM3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
DDX53Q86TM3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX53Q86TM3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX53Q86TM3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms