Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAI1Q7Z5J4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RAI1Q7Z5J4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAI1Q7Z5J4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.64■□□□□ 0.57
RAI1Q7Z5J4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.64■□□□□ 0.57
RAI1Q7Z5J4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAI1Q7Z5J4 DUSP8P5-201ENST00000422884 1815 ntBASIC18.63■□□□□ 0.57
RAI1Q7Z5J4 AC005224.4-201ENST00000583262 1652 ntBASIC18.63■□□□□ 0.57
RAI1Q7Z5J4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.63■□□□□ 0.57
RAI1Q7Z5J4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAI1Q7Z5J4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.63■□□□□ 0.57
RAI1Q7Z5J4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.63■□□□□ 0.57
RAI1Q7Z5J4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.63■□□□□ 0.57
RAI1Q7Z5J4 MFSD11-216ENST00000590393 1141 ntBASIC18.63■□□□□ 0.57
RAI1Q7Z5J4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAI1Q7Z5J4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAI1Q7Z5J4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAI1Q7Z5J4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAI1Q7Z5J4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 KRT18P11-201ENST00000435214 1283 ntBASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAI1Q7Z5J4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI1Q7Z5J4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI1Q7Z5J4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAI1Q7Z5J4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAI1Q7Z5J4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
RAI1Q7Z5J4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.61■□□□□ 0.57
RAI1Q7Z5J4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI1Q7Z5J4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI1Q7Z5J4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI1Q7Z5J4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RAI1Q7Z5J4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAI1Q7Z5J4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.61■□□□□ 0.57
RAI1Q7Z5J4 AL050303.2-201ENST00000619798 666 ntBASIC18.61■□□□□ 0.57
RAI1Q7Z5J4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RAI1Q7Z5J4 KRT87P-202ENST00000534226 1464 ntBASIC18.6■□□□□ 0.57
RAI1Q7Z5J4 AL353803.4-201ENST00000565882 1934 ntBASIC18.6■□□□□ 0.57
RAI1Q7Z5J4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI1Q7Z5J4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI1Q7Z5J4 NCF1B-203ENST00000435988 1254 ntBASIC18.6■□□□□ 0.57
RAI1Q7Z5J4 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.6■□□□□ 0.57
RAI1Q7Z5J4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.6■□□□□ 0.57
RAI1Q7Z5J4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI1Q7Z5J4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAI1Q7Z5J4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 ABHD17AP1-201ENST00000358206 933 ntBASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RAI1Q7Z5J4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAI1Q7Z5J4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RAI1Q7Z5J4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAI1Q7Z5J4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RAI1Q7Z5J4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAI1Q7Z5J4 AL355802.2-201ENST00000402069 882 ntBASIC18.58■□□□□ 0.56
RAI1Q7Z5J4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.58■□□□□ 0.56
RAI1Q7Z5J4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
RAI1Q7Z5J4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.58■□□□□ 0.56
RAI1Q7Z5J4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAI1Q7Z5J4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAI1Q7Z5J4 AC104187.1-201ENST00000607510 612 ntBASIC18.58■□□□□ 0.56
RAI1Q7Z5J4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.58■□□□□ 0.56
RAI1Q7Z5J4 C9orf163-202ENST00000624034 2573 ntBASIC18.58■□□□□ 0.56
RAI1Q7Z5J4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAI1Q7Z5J4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
RAI1Q7Z5J4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.57■□□□□ 0.56
RAI1Q7Z5J4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAI1Q7Z5J4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.57■□□□□ 0.56
RAI1Q7Z5J4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
RAI1Q7Z5J4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAI1Q7Z5J4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms