Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SSX8Q7RTT4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SSX8Q7RTT4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.76■□□□□ 0.59
SSX8Q7RTT4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SSX8Q7RTT4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.76■□□□□ 0.59
SSX8Q7RTT4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSX8Q7RTT4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.75■□□□□ 0.59
SSX8Q7RTT4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSX8Q7RTT4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSX8Q7RTT4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SSX8Q7RTT4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SSX8Q7RTT4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.75■□□□□ 0.59
SSX8Q7RTT4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.75■□□□□ 0.59
SSX8Q7RTT4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.75■□□□□ 0.59
SSX8Q7RTT4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSX8Q7RTT4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSX8Q7RTT4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSX8Q7RTT4 KRT87P-202ENST00000534226 1464 ntBASIC18.75■□□□□ 0.59
SSX8Q7RTT4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
SSX8Q7RTT4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSX8Q7RTT4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.74■□□□□ 0.59
SSX8Q7RTT4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSX8Q7RTT4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.74■□□□□ 0.59
SSX8Q7RTT4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.74■□□□□ 0.59
SSX8Q7RTT4 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.74■□□□□ 0.59
SSX8Q7RTT4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.74■□□□□ 0.59
SSX8Q7RTT4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.74■□□□□ 0.59
SSX8Q7RTT4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.74■□□□□ 0.59
SSX8Q7RTT4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSX8Q7RTT4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.74■□□□□ 0.59
SSX8Q7RTT4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.74■□□□□ 0.59
SSX8Q7RTT4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SSX8Q7RTT4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SSX8Q7RTT4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSX8Q7RTT4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSX8Q7RTT4 AP004607.4-201ENST00000530158 1459 ntBASIC18.72■□□□□ 0.59
SSX8Q7RTT4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSX8Q7RTT4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSX8Q7RTT4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSX8Q7RTT4 AC016769.1-201ENST00000409132 1010 ntBASIC18.72■□□□□ 0.59
SSX8Q7RTT4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSX8Q7RTT4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.72■□□□□ 0.59
SSX8Q7RTT4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.72■□□□□ 0.59
SSX8Q7RTT4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SSX8Q7RTT4 ESRRAP2-201ENST00000418437 1549 ntBASIC18.72■□□□□ 0.59
SSX8Q7RTT4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSX8Q7RTT4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSX8Q7RTT4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SSX8Q7RTT4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSX8Q7RTT4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SSX8Q7RTT4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SSX8Q7RTT4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.71■□□□□ 0.59
SSX8Q7RTT4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSX8Q7RTT4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSX8Q7RTT4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.71■□□□□ 0.59
SSX8Q7RTT4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSX8Q7RTT4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.71■□□□□ 0.59
SSX8Q7RTT4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.71■□□□□ 0.59
SSX8Q7RTT4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.71■□□□□ 0.59
SSX8Q7RTT4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
SSX8Q7RTT4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 AP004607.7-201ENST00000527152 1677 ntBASIC18.7■□□□□ 0.58
SSX8Q7RTT4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 AC137761.2-201ENST00000561729 223 ntBASIC18.7■□□□□ 0.58
SSX8Q7RTT4 AC145350.3-201ENST00000569033 163 ntBASIC18.7■□□□□ 0.58
SSX8Q7RTT4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX8Q7RTT4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SSX8Q7RTT4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms