Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL4Q6ZR62 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RTL4Q6ZR62 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
RTL4Q6ZR62 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RTL4Q6ZR62 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL4Q6ZR62 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL4Q6ZR62 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RTL4Q6ZR62 AP005435.1-201ENST00000529293 1178 ntBASIC20.24■□□□□ 0.83
RTL4Q6ZR62 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.24■□□□□ 0.83
RTL4Q6ZR62 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RTL4Q6ZR62 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL4Q6ZR62 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RTL4Q6ZR62 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL4Q6ZR62 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL4Q6ZR62 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RTL4Q6ZR62 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL4Q6ZR62 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL4Q6ZR62 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RTL4Q6ZR62 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RTL4Q6ZR62 ESRRAP2-201ENST00000418437 1549 ntBASIC20.22■□□□□ 0.83
RTL4Q6ZR62 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL4Q6ZR62 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTL4Q6ZR62 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.22■□□□□ 0.83
RTL4Q6ZR62 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RTL4Q6ZR62 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.22■□□□□ 0.83
RTL4Q6ZR62 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL4Q6ZR62 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RTL4Q6ZR62 GUSBP5-202ENST00000510805 1989 ntBASIC20.22■□□□□ 0.83
RTL4Q6ZR62 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL4Q6ZR62 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
RTL4Q6ZR62 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.22■□□□□ 0.83
RTL4Q6ZR62 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL4Q6ZR62 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL4Q6ZR62 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RTL4Q6ZR62 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTL4Q6ZR62 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RTL4Q6ZR62 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RTL4Q6ZR62 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.21■□□□□ 0.83
RTL4Q6ZR62 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTL4Q6ZR62 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.21■□□□□ 0.83
RTL4Q6ZR62 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.21■□□□□ 0.83
RTL4Q6ZR62 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.21■□□□□ 0.83
RTL4Q6ZR62 EP400NL-214ENST00000641289 2402 ntBASIC20.21■□□□□ 0.83
RTL4Q6ZR62 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
RTL4Q6ZR62 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL4Q6ZR62 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RTL4Q6ZR62 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.2■□□□□ 0.82
RTL4Q6ZR62 RARRES2P6-201ENST00000567333 442 ntBASIC20.2■□□□□ 0.82
RTL4Q6ZR62 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.2■□□□□ 0.82
RTL4Q6ZR62 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL4Q6ZR62 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.2■□□□□ 0.82
RTL4Q6ZR62 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RTL4Q6ZR62 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RTL4Q6ZR62 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.19■□□□□ 0.82
RTL4Q6ZR62 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.19■□□□□ 0.82
RTL4Q6ZR62 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL4Q6ZR62 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL4Q6ZR62 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL4Q6ZR62 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RTL4Q6ZR62 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.19■□□□□ 0.82
RTL4Q6ZR62 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTL4Q6ZR62 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RTL4Q6ZR62 AC068587.7-201ENST00000641602 218 ntBASIC20.19■□□□□ 0.82
RTL4Q6ZR62 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.19■□□□□ 0.82
RTL4Q6ZR62 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL4Q6ZR62 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.18■□□□□ 0.82
RTL4Q6ZR62 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTL4Q6ZR62 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL4Q6ZR62 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RTL4Q6ZR62 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
RTL4Q6ZR62 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL4Q6ZR62 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL4Q6ZR62 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL4Q6ZR62 MIR572-201ENST00000384983 95 ntBASIC20.17■□□□□ 0.82
RTL4Q6ZR62 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.17■□□□□ 0.82
RTL4Q6ZR62 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL4Q6ZR62 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.17■□□□□ 0.82
RTL4Q6ZR62 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTL4Q6ZR62 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.17■□□□□ 0.82
RTL4Q6ZR62 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL4Q6ZR62 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTL4Q6ZR62 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
RTL4Q6ZR62 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms