Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00575Q6W349 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LINC00575Q6W349 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00575Q6W349 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LINC00575Q6W349 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00575Q6W349 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
LINC00575Q6W349 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00575Q6W349 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00575Q6W349 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00575Q6W349 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00575Q6W349 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00575Q6W349 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00575Q6W349 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00575Q6W349 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00575Q6W349 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC00575Q6W349 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00575Q6W349 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00575Q6W349 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00575Q6W349 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC00575Q6W349 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00575Q6W349 AC009831.1-201ENST00000580420 1582 ntBASIC13.71□□□□□ -0.21
LINC00575Q6W349 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00575Q6W349 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00575Q6W349 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00575Q6W349 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC00575Q6W349 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC00575Q6W349 AC133552.2-201ENST00000619106 1032 ntBASIC13.71□□□□□ -0.21
LINC00575Q6W349 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00575Q6W349 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC13.71□□□□□ -0.22
LINC00575Q6W349 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
LINC00575Q6W349 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
LINC00575Q6W349 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC00575Q6W349 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC13.71□□□□□ -0.22
LINC00575Q6W349 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00575Q6W349 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00575Q6W349 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00575Q6W349 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00575Q6W349 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00575Q6W349 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00575Q6W349 HES4-202ENST00000428771 1040 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00575Q6W349 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00575Q6W349 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00575Q6W349 CEP120-209ENST00000515110 606 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00575Q6W349 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00575Q6W349 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00575Q6W349 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LINC00575Q6W349 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00575Q6W349 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00575Q6W349 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00575Q6W349 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00575Q6W349 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LINC00575Q6W349 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00575Q6W349 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LINC00575Q6W349 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00575Q6W349 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00575Q6W349 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LINC00575Q6W349 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00575Q6W349 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00575Q6W349 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LINC00575Q6W349 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LINC00575Q6W349 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00575Q6W349 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00575Q6W349 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00575Q6W349 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC13.69□□□□□ -0.22
LINC00575Q6W349 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LINC00575Q6W349 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00575Q6W349 IDNK-203ENST00000405990 629 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00575Q6W349 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00575Q6W349 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00575Q6W349 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00575Q6W349 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00575Q6W349 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00575Q6W349 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00575Q6W349 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
LINC00575Q6W349 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00575Q6W349 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00575Q6W349 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00575Q6W349 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC13.69□□□□□ -0.22
LINC00575Q6W349 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00575Q6W349 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00575Q6W349 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00575Q6W349 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00575Q6W349 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LINC00575Q6W349 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
LINC00575Q6W349 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00575Q6W349 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00575Q6W349 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00575Q6W349 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00575Q6W349 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00575Q6W349 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00575Q6W349 ME2-206ENST00000638410 2289 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00575Q6W349 ME2-210ENST00000639255 2262 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00575Q6W349 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00575Q6W349 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LINC00575Q6W349 GAK-223ENST00000628912 497 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00575Q6W349 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00575Q6W349 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00575Q6W349 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00575Q6W349 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00575Q6W349 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms