Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 KRT18P20-201ENST00000548986 1279 ntBASIC27.69■■■□□ 2.02
RC3H1Q5TC82 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC27.69■■■□□ 2.02
RC3H1Q5TC82 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC27.69■■■□□ 2.02
RC3H1Q5TC82 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC27.69■■■□□ 2.02
RC3H1Q5TC82 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.69■■■□□ 2.02
RC3H1Q5TC82 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.69■■■□□ 2.02
RC3H1Q5TC82 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RC3H1Q5TC82 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RC3H1Q5TC82 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RC3H1Q5TC82 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.68■■■□□ 2.02
RC3H1Q5TC82 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RC3H1Q5TC82 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RC3H1Q5TC82 SERP1-208ENST00000491660 830 ntTSL 2 BASIC27.68■■■□□ 2.02
RC3H1Q5TC82 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC27.68■■■□□ 2.02
RC3H1Q5TC82 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC27.68■■■□□ 2.02
RC3H1Q5TC82 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RC3H1Q5TC82 AC004812.2-201ENST00000611079 2094 ntBASIC27.68■■■□□ 2.02
RC3H1Q5TC82 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC27.67■■■□□ 2.02
RC3H1Q5TC82 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
RC3H1Q5TC82 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
RC3H1Q5TC82 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.67■■■□□ 2.02
RC3H1Q5TC82 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC27.67■■■□□ 2.02
RC3H1Q5TC82 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
RC3H1Q5TC82 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RC3H1Q5TC82 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.66■■■□□ 2.02
RC3H1Q5TC82 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RC3H1Q5TC82 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RC3H1Q5TC82 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
RC3H1Q5TC82 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RC3H1Q5TC82 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RC3H1Q5TC82 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
RC3H1Q5TC82 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC27.65■■■□□ 2.02
RC3H1Q5TC82 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC27.65■■■□□ 2.02
RC3H1Q5TC82 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RC3H1Q5TC82 AC105036.2-201ENST00000569468 176 ntBASIC27.65■■■□□ 2.02
RC3H1Q5TC82 AC138907.5-202ENST00000569484 235 ntBASIC27.65■■■□□ 2.02
RC3H1Q5TC82 AC010536.3-201ENST00000620306 533 ntBASIC27.65■■■□□ 2.02
RC3H1Q5TC82 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RC3H1Q5TC82 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RC3H1Q5TC82 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC27.64■■■□□ 2.02
RC3H1Q5TC82 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC27.64■■■□□ 2.02
RC3H1Q5TC82 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC27.64■■■□□ 2.02
RC3H1Q5TC82 AC010141.2-201ENST00000452426 721 ntBASIC27.64■■■□□ 2.02
RC3H1Q5TC82 FAM201B-201ENST00000458407 597 ntBASIC27.64■■■□□ 2.02
RC3H1Q5TC82 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RC3H1Q5TC82 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
RC3H1Q5TC82 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC27.63■■■□□ 2.01
RC3H1Q5TC82 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
RC3H1Q5TC82 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RC3H1Q5TC82 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC27.63■■■□□ 2.01
RC3H1Q5TC82 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RC3H1Q5TC82 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RC3H1Q5TC82 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC27.63■■■□□ 2.01
RC3H1Q5TC82 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.63■■■□□ 2.01
RC3H1Q5TC82 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC27.62■■■□□ 2.01
RC3H1Q5TC82 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC27.62■■■□□ 2.01
RC3H1Q5TC82 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RC3H1Q5TC82 TBCB-214ENST00000629269 413 ntTSL 5 BASIC27.62■■■□□ 2.01
RC3H1Q5TC82 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RC3H1Q5TC82 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
RC3H1Q5TC82 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
RC3H1Q5TC82 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
RC3H1Q5TC82 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC27.61■■■□□ 2.01
RC3H1Q5TC82 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
RC3H1Q5TC82 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC27.61■■■□□ 2.01
RC3H1Q5TC82 AC098934.4-201ENST00000564127 592 ntBASIC27.61■■■□□ 2.01
RC3H1Q5TC82 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC27.61■■■□□ 2.01
RC3H1Q5TC82 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC27.61■■■□□ 2.01
RC3H1Q5TC82 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC27.61■■■□□ 2.01
RC3H1Q5TC82 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RC3H1Q5TC82 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
RC3H1Q5TC82 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.6■■■□□ 2.01
RC3H1Q5TC82 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RC3H1Q5TC82 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RC3H1Q5TC82 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC27.6■■■□□ 2.01
RC3H1Q5TC82 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
RC3H1Q5TC82 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.59■■■□□ 2.01
RC3H1Q5TC82 LINC01124-201ENST00000409786 2117 ntBASIC27.59■■■□□ 2.01
RC3H1Q5TC82 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
RC3H1Q5TC82 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.59■■■□□ 2.01
RC3H1Q5TC82 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC27.59■■■□□ 2.01
RC3H1Q5TC82 SLC7A5P1-201ENST00000568957 537 ntBASIC27.59■■■□□ 2.01
RC3H1Q5TC82 DUSP8P5-201ENST00000422884 1815 ntBASIC27.59■■■□□ 2.01
RC3H1Q5TC82 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
RC3H1Q5TC82 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
RC3H1Q5TC82 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
RC3H1Q5TC82 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RC3H1Q5TC82 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC27.58■■■□□ 2.01
RC3H1Q5TC82 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
RC3H1Q5TC82 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
RC3H1Q5TC82 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
RC3H1Q5TC82 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
RC3H1Q5TC82 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC27.58■■■□□ 2.01
RC3H1Q5TC82 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
RC3H1Q5TC82 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC27.58■■■□□ 2.01
RC3H1Q5TC82 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
RC3H1Q5TC82 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC27.57■■■□□ 2
RC3H1Q5TC82 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC27.57■■■□□ 2
RC3H1Q5TC82 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
RC3H1Q5TC82 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC27.57■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms