Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL13A1Q5TAT6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
COL13A1Q5TAT6 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.97■■□□□ 1.59
COL13A1Q5TAT6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.97■■□□□ 1.59
COL13A1Q5TAT6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.97■■□□□ 1.59
COL13A1Q5TAT6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL13A1Q5TAT6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.97■■□□□ 1.59
COL13A1Q5TAT6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL13A1Q5TAT6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL13A1Q5TAT6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL13A1Q5TAT6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL13A1Q5TAT6 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.96■■□□□ 1.59
COL13A1Q5TAT6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC24.96■■□□□ 1.59
COL13A1Q5TAT6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL13A1Q5TAT6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC24.96■■□□□ 1.59
COL13A1Q5TAT6 EEF1DP3-203ENST00000566025 782 ntBASIC24.96■■□□□ 1.59
COL13A1Q5TAT6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.96■■□□□ 1.59
COL13A1Q5TAT6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
COL13A1Q5TAT6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL13A1Q5TAT6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL13A1Q5TAT6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL13A1Q5TAT6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 RPS2P55-201ENST00000397318 883 ntBASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 AC026396.1-201ENST00000419388 421 ntBASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 AC107956.1-201ENST00000494359 873 ntBASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.95■■□□□ 1.58
COL13A1Q5TAT6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 AC097639.1-201ENST00000565519 1891 ntBASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL13A1Q5TAT6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL13A1Q5TAT6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
COL13A1Q5TAT6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL13A1Q5TAT6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL13A1Q5TAT6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL13A1Q5TAT6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
COL13A1Q5TAT6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
COL13A1Q5TAT6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC24.93■■□□□ 1.58
COL13A1Q5TAT6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL13A1Q5TAT6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC24.93■■□□□ 1.58
COL13A1Q5TAT6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC24.93■■□□□ 1.58
COL13A1Q5TAT6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL13A1Q5TAT6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.93■■□□□ 1.58
COL13A1Q5TAT6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
COL13A1Q5TAT6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL13A1Q5TAT6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL13A1Q5TAT6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC24.92■■□□□ 1.58
COL13A1Q5TAT6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC24.92■■□□□ 1.58
COL13A1Q5TAT6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC24.92■■□□□ 1.58
COL13A1Q5TAT6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC24.92■■□□□ 1.58
COL13A1Q5TAT6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.92■■□□□ 1.58
COL13A1Q5TAT6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL13A1Q5TAT6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL13A1Q5TAT6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.91■■□□□ 1.58
COL13A1Q5TAT6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.91■■□□□ 1.58
COL13A1Q5TAT6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL13A1Q5TAT6 KRT126P-201ENST00000549467 1181 ntBASIC24.91■■□□□ 1.58
COL13A1Q5TAT6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL13A1Q5TAT6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.91■■□□□ 1.58
COL13A1Q5TAT6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL13A1Q5TAT6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.9■■□□□ 1.58
COL13A1Q5TAT6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL13A1Q5TAT6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL13A1Q5TAT6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
COL13A1Q5TAT6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24.9■■□□□ 1.58
COL13A1Q5TAT6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC24.9■■□□□ 1.58
COL13A1Q5TAT6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.9■■□□□ 1.58
COL13A1Q5TAT6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.9■■□□□ 1.58
COL13A1Q5TAT6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL13A1Q5TAT6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
COL13A1Q5TAT6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL13A1Q5TAT6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC24.89■■□□□ 1.58
COL13A1Q5TAT6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL13A1Q5TAT6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
COL13A1Q5TAT6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL13A1Q5TAT6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
COL13A1Q5TAT6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC24.89■■□□□ 1.58
COL13A1Q5TAT6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC24.89■■□□□ 1.58
COL13A1Q5TAT6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms