Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MIR718-201ENST00000390190 70 ntBASIC21.22■□□□□ 0.99
RSPO4Q2I0M5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.22■□□□□ 0.99
RSPO4Q2I0M5 CYP2T1P-201ENST00000432607 1285 ntBASIC21.22■□□□□ 0.99
RSPO4Q2I0M5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.22■□□□□ 0.99
RSPO4Q2I0M5 MIR4497-201ENST00000583208 89 ntBASIC21.22■□□□□ 0.99
RSPO4Q2I0M5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RSPO4Q2I0M5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.22■□□□□ 0.99
RSPO4Q2I0M5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.22■□□□□ 0.99
RSPO4Q2I0M5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RSPO4Q2I0M5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RSPO4Q2I0M5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 AC073648.6-201ENST00000641589 218 ntBASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.21■□□□□ 0.99
RSPO4Q2I0M5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RSPO4Q2I0M5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RSPO4Q2I0M5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RSPO4Q2I0M5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RSPO4Q2I0M5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.2■□□□□ 0.98
RSPO4Q2I0M5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.2■□□□□ 0.98
RSPO4Q2I0M5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.2■□□□□ 0.98
RSPO4Q2I0M5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.2■□□□□ 0.98
RSPO4Q2I0M5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RSPO4Q2I0M5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.2■□□□□ 0.98
RSPO4Q2I0M5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.19■□□□□ 0.98
RSPO4Q2I0M5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
RSPO4Q2I0M5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RSPO4Q2I0M5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RSPO4Q2I0M5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RSPO4Q2I0M5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RSPO4Q2I0M5 AC010141.3-201ENST00000456659 717 ntBASIC21.19■□□□□ 0.98
RSPO4Q2I0M5 AC013268.1-206ENST00000638368 961 ntBASIC21.19■□□□□ 0.98
RSPO4Q2I0M5 AC112229.1-201ENST00000639295 961 ntBASIC21.19■□□□□ 0.98
RSPO4Q2I0M5 MYC-209ENST00000641252 345 ntBASIC21.19■□□□□ 0.98
RSPO4Q2I0M5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RSPO4Q2I0M5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 AC092803.2-201ENST00000564287 1899 ntBASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 BX276092.2-201ENST00000417668 665 ntBASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 AC005224.4-201ENST00000583262 1652 ntBASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RSPO4Q2I0M5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 UNC93B5-201ENST00000530315 699 ntBASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 OR10C1-204ENST00000622521 1039 ntBASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 AC068338.2-201ENST00000563278 1430 ntBASIC21.17■□□□□ 0.98
RSPO4Q2I0M5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RSPO4Q2I0M5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RSPO4Q2I0M5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RSPO4Q2I0M5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RSPO4Q2I0M5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RSPO4Q2I0M5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.16■□□□□ 0.98
RSPO4Q2I0M5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RSPO4Q2I0M5 AC093787.1-201ENST00000450396 207 ntBASIC21.16■□□□□ 0.98
RSPO4Q2I0M5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RSPO4Q2I0M5 AC026366.1-201ENST00000488803 879 ntBASIC21.16■□□□□ 0.98
RSPO4Q2I0M5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.16■□□□□ 0.98
RSPO4Q2I0M5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RSPO4Q2I0M5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RSPO4Q2I0M5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms