Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 SPC42YKL042W 1092 nt3.56□□□□□ -1.84
CLP1Q08685 VPS71YML041C 843 nt3.56□□□□□ -1.84
CLP1Q08685 IMP4YNL075W 873 nt3.56□□□□□ -1.84
CLP1Q08685 AKR1YDR264C 2295 nt3.56□□□□□ -1.84
CLP1Q08685 OAF3YKR064W 2592 nt3.56□□□□□ -1.84
CLP1Q08685 YLR352WYLR352W 2424 nt3.55□□□□□ -1.84
CLP1Q08685 BCH1YMR237W 2175 nt3.55□□□□□ -1.84
CLP1Q08685 TED1YIL039W 1422 nt3.55□□□□□ -1.84
CLP1Q08685 RPA14YDR156W 414 nt3.55□□□□□ -1.84
CLP1Q08685 CPR8YNR028W 927 nt3.55□□□□□ -1.84
CLP1Q08685 RPS7AYOR096W 573 nt3.55□□□□□ -1.84
CLP1Q08685 DGA1YOR245C 1257 nt3.55□□□□□ -1.84
CLP1Q08685 PRM15YMR278W 1869 nt3.55□□□□□ -1.84
CLP1Q08685 IOC3YFR013W 2364 nt3.55□□□□□ -1.84
CLP1Q08685 FLO5YHR211W 3228 nt3.55□□□□□ -1.84
CLP1Q08685 MSD1YPL104W 1977 nt3.54□□□□□ -1.84
CLP1Q08685 TFC1YBR123C 1950 nt3.54□□□□□ -1.84
CLP1Q08685 LCB4YOR171C 1875 nt3.54□□□□□ -1.84
CLP1Q08685 SMC2YFR031C 3513 nt3.54□□□□□ -1.84
CLP1Q08685 RMD1YDL001W 1293 nt3.54□□□□□ -1.84
CLP1Q08685 YDR271CYDR271C 372 nt3.54□□□□□ -1.84
CLP1Q08685 AIR1YIL079C 1083 nt3.54□□□□□ -1.84
CLP1Q08685 COQ9YLR201C 783 nt3.54□□□□□ -1.84
CLP1Q08685 YMR141CYMR141C 309 nt3.54□□□□□ -1.84
CLP1Q08685 PFA4YOL003C 1137 nt3.54□□□□□ -1.84
CLP1Q08685 PEX11YOL147C 711 nt3.54□□□□□ -1.84
CLP1Q08685 YPL014WYPL014W 1146 nt3.54□□□□□ -1.84
CLP1Q08685 TSR1YDL060W 2367 nt3.54□□□□□ -1.84
CLP1Q08685 MTR4YJL050W 3222 nt3.53□□□□□ -1.84
CLP1Q08685 EPO1YMR124W 2832 nt3.53□□□□□ -1.84
CLP1Q08685 TCM62YBR044C 1719 nt3.53□□□□□ -1.84
CLP1Q08685 NPL4YBR170C 1743 nt3.53□□□□□ -1.84
CLP1Q08685 BCS1YDR375C 1371 nt3.53□□□□□ -1.84
CLP1Q08685 MIC60YKR016W 1623 nt3.53□□□□□ -1.84
CLP1Q08685 TAO3YIL129C 7131 nt3.53□□□□□ -1.84
CLP1Q08685 SPO12YHR152W 522 nt3.53□□□□□ -1.84
CLP1Q08685 RPL22AYLR061W 366 nt3.53□□□□□ -1.84
CLP1Q08685 YNL143CYNL143C 393 nt3.53□□□□□ -1.84
CLP1Q08685 FDH1YOR388C 1131 nt3.53□□□□□ -1.84
CLP1Q08685 YDR132CYDR132C 1488 nt3.53□□□□□ -1.84
CLP1Q08685 MUM3YOR298W 1440 nt3.53□□□□□ -1.85
CLP1Q08685 CHD1YER164W 4407 nt3.52□□□□□ -1.85
CLP1Q08685 CCM1YGR150C 2595 nt3.52□□□□□ -1.85
CLP1Q08685 HIM1YDR317W 1245 nt3.52□□□□□ -1.85
CLP1Q08685 PCL6YER059W 1263 nt3.52□□□□□ -1.85
CLP1Q08685 SPO74YGL170C 1242 nt3.52□□□□□ -1.85
CLP1Q08685 MTC3YGL226W 372 nt3.52□□□□□ -1.85
CLP1Q08685 AUR1YKL004W 1206 nt3.52□□□□□ -1.85
CLP1Q08685 ECM4YKR076W 1113 nt3.52□□□□□ -1.85
CLP1Q08685 YLR154C-HYLR154C-H 132 nt3.52□□□□□ -1.85
CLP1Q08685 YLR156C-AYLR156C-A 132 nt3.52□□□□□ -1.85
CLP1Q08685 YLR157C-CYLR157C-C 132 nt3.52□□□□□ -1.85
CLP1Q08685 YLR159C-AYLR159C-A 132 nt3.52□□□□□ -1.85
CLP1Q08685 RPL19BYBL027W 570 nt3.52□□□□□ -1.85
CLP1Q08685 RAD14YMR201C 1116 nt3.52□□□□□ -1.85
CLP1Q08685 DER1YBR201W 636 nt3.52□□□□□ -1.85
CLP1Q08685 RRN6YBL014C 2685 nt3.52□□□□□ -1.85
CLP1Q08685 YOR022CYOR022C 2148 nt3.52□□□□□ -1.85
CLP1Q08685 SPT6YGR116W 4356 nt3.51□□□□□ -1.85
CLP1Q08685 YHR202WYHR202W 1809 nt3.51□□□□□ -1.85
CLP1Q08685 ALA1YOR335C 2877 nt3.51□□□□□ -1.85
CLP1Q08685 MTH1YDR277C 1302 nt3.51□□□□□ -1.85
CLP1Q08685 UBX5YDR330W 1503 nt3.51□□□□□ -1.85
CLP1Q08685 MSR1YHR091C 1932 nt3.51□□□□□ -1.85
CLP1Q08685 YDR249CYDR249C 1122 nt3.51□□□□□ -1.85
CLP1Q08685 RPS21BYJL136C 264 nt3.51□□□□□ -1.85
CLP1Q08685 YPT7YML001W 627 nt3.51□□□□□ -1.85
CLP1Q08685 LDS2YOL047C 1071 nt3.51□□□□□ -1.85
CLP1Q08685 PLP2YOR281C 861 nt3.51□□□□□ -1.85
CLP1Q08685 TEC1YBR083W 1461 nt3.51□□□□□ -1.85
CLP1Q08685 YOL019WYOL019W 1656 nt3.51□□□□□ -1.85
CLP1Q08685 EMP70YLR083C 2004 nt3.51□□□□□ -1.85
CLP1Q08685 YDR089WYDR089W 2610 nt3.51□□□□□ -1.85
CLP1Q08685 ISM1YPL040C 3009 nt3.5□□□□□ -1.85
CLP1Q08685 CPA2YJR109C 3357 nt3.5□□□□□ -1.85
CLP1Q08685 TRE2YOR256C 2430 nt3.5□□□□□ -1.85
CLP1Q08685 YDL032WYDL032W 312 nt3.5□□□□□ -1.85
CLP1Q08685 FAD1YDL045C 921 nt3.5□□□□□ -1.85
CLP1Q08685 SKI8YGL213C 1194 nt3.5□□□□□ -1.85
CLP1Q08685 MRT4YKL009W 711 nt3.5□□□□□ -1.85
CLP1Q08685 YOR073W-AYOR073W-A 234 nt3.5□□□□□ -1.85
CLP1Q08685 YPL071CYPL071C 471 nt3.5□□□□□ -1.85
CLP1Q08685 HUT1YPL244C 1020 nt3.5□□□□□ -1.85
CLP1Q08685 YBR137WYBR137W 540 nt3.5□□□□□ -1.85
CLP1Q08685 SIR1YKR101W 1965 nt3.5□□□□□ -1.85
CLP1Q08685 GIS4YML006C 2325 nt3.5□□□□□ -1.85
CLP1Q08685 TRM13YOL125W 1431 nt3.5□□□□□ -1.85
CLP1Q08685 DAP2YHR028C 2457 nt3.5□□□□□ -1.85
CLP1Q08685 BMS1YPL217C 3552 nt3.5□□□□□ -1.85
CLP1Q08685 NUP159YIL115C 4383 nt3.49□□□□□ -1.85
CLP1Q08685 YPR022CYPR022C 3402 nt3.49□□□□□ -1.85
CLP1Q08685 URA2YJL130C 6645 nt3.49□□□□□ -1.85
CLP1Q08685 TRS120YDR407C 3870 nt3.49□□□□□ -1.85
CLP1Q08685 TRX3YCR083W 384 nt3.49□□□□□ -1.85
CLP1Q08685 MMS21YEL019C 804 nt3.49□□□□□ -1.85
CLP1Q08685 LIF1YGL090W 1266 nt3.49□□□□□ -1.85
CLP1Q08685 MRPL25YGR076C 474 nt3.49□□□□□ -1.85
CLP1Q08685 RPS23AYGR118W 438 nt3.49□□□□□ -1.85
CLP1Q08685 YMR122W-AYMR122W-A 255 nt3.49□□□□□ -1.85
CLP1Q08685 TRI1YMR233W 681 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms