Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 OPY1YBR129C 987 nt3.28□□□□□ -1.88
RRP40Q08285 PEX1YKL197C 3132 nt3.28□□□□□ -1.88
RRP40Q08285 RAD2YGR258C 3096 nt3.28□□□□□ -1.89
RRP40Q08285 SIP1YDR422C 2448 nt3.28□□□□□ -1.89
RRP40Q08285 BYE1YKL005C 1785 nt3.28□□□□□ -1.89
RRP40Q08285 TYR1YBR166C 1359 nt3.27□□□□□ -1.89
RRP40Q08285 SSM4YIL030C 3960 nt3.27□□□□□ -1.89
RRP40Q08285 RSC1YGR056W 2787 nt3.27□□□□□ -1.89
RRP40Q08285 APN2YBL019W 1563 nt3.27□□□□□ -1.89
RRP40Q08285 RPB7YDR404C 516 nt3.27□□□□□ -1.89
RRP40Q08285 YFL041W-AYFL041W-A 192 nt3.27□□□□□ -1.89
RRP40Q08285 MBR1YKL093W 1020 nt3.27□□□□□ -1.89
RRP40Q08285 YAL065CYAL065C 387 nt3.27□□□□□ -1.89
RRP40Q08285 EMG1YLR186W 759 nt3.27□□□□□ -1.89
RRP40Q08285 GCD7YLR291C 1146 nt3.27□□□□□ -1.89
RRP40Q08285 PRX1YBL064C 786 nt3.27□□□□□ -1.89
RRP40Q08285 MCK1YNL307C 1128 nt3.27□□□□□ -1.89
RRP40Q08285 ARO7YPR060C 771 nt3.27□□□□□ -1.89
RRP40Q08285 ZDS2YML109W 2829 nt3.26□□□□□ -1.89
RRP40Q08285 RMD1YDL001W 1293 nt3.26□□□□□ -1.89
RRP40Q08285 STE14YDR410C 720 nt3.26□□□□□ -1.89
RRP40Q08285 FMP32YFL046W 624 nt3.26□□□□□ -1.89
RRP40Q08285 YJR037WYJR037W 384 nt3.26□□□□□ -1.89
RRP40Q08285 GTT2YLL060C 702 nt3.26□□□□□ -1.89
RRP40Q08285 RPL22AYLR061W 366 nt3.26□□□□□ -1.89
RRP40Q08285 SPC3YLR066W 555 nt3.26□□□□□ -1.89
RRP40Q08285 PPA2YMR267W 933 nt3.26□□□□□ -1.89
RRP40Q08285 MIF2YKL089W 1650 nt3.26□□□□□ -1.89
RRP40Q08285 SEA4YBL104C 3117 nt3.26□□□□□ -1.89
RRP40Q08285 SPB4YFL002C 1821 nt3.26□□□□□ -1.89
RRP40Q08285 MPC54YOR177C 1395 nt3.25□□□□□ -1.89
RRP40Q08285 MDM38YOL027C 1722 nt3.25□□□□□ -1.89
RRP40Q08285 RNR1YER070W 2667 nt3.25□□□□□ -1.89
RRP40Q08285 HIM1YDR317W 1245 nt3.25□□□□□ -1.89
RRP40Q08285 RPS18AYDR450W 441 nt3.25□□□□□ -1.89
RRP40Q08285 RPS8BYER102W 603 nt3.25□□□□□ -1.89
RRP40Q08285 YHI9YHR029C 885 nt3.25□□□□□ -1.89
RRP40Q08285 YIL086CYIL086C 309 nt3.25□□□□□ -1.89
RRP40Q08285 RPS8AYBL072C 603 nt3.25□□□□□ -1.89
RRP40Q08285 MFA2YNL145W 117 nt3.25□□□□□ -1.89
RRP40Q08285 DSE3YOR264W 1293 nt3.25□□□□□ -1.89
RRP40Q08285 POC4YPL144W 447 nt3.25□□□□□ -1.89
RRP40Q08285 TSR1YDL060W 2367 nt3.25□□□□□ -1.89
RRP40Q08285 BUD6YLR319C 2367 nt3.25□□□□□ -1.89
RRP40Q08285 SPA2YLL021W 4401 nt3.25□□□□□ -1.89
RRP40Q08285 CHK1YBR274W 1584 nt3.25□□□□□ -1.89
RRP40Q08285 AIM14YGL160W 1713 nt3.24□□□□□ -1.89
RRP40Q08285 YMR018WYMR018W 1545 nt3.24□□□□□ -1.89
RRP40Q08285 DAN4YJR151C 3486 nt3.24□□□□□ -1.89
RRP40Q08285 CMK1YFR014C 1341 nt3.24□□□□□ -1.89
RRP40Q08285 MEK1YOR351C 1494 nt3.24□□□□□ -1.89
RRP40Q08285 PRR2YDL214C 2100 nt3.24□□□□□ -1.89
RRP40Q08285 CLC1YGR167W 702 nt3.24□□□□□ -1.89
RRP40Q08285 ECM4YKR076W 1113 nt3.24□□□□□ -1.89
RRP40Q08285 YNR071CYNR071C 1029 nt3.24□□□□□ -1.89
RRP40Q08285 MED7YOL135C 669 nt3.24□□□□□ -1.89
RRP40Q08285 PSF3YOL146W 585 nt3.24□□□□□ -1.89
RRP40Q08285 MPD1YOR288C 957 nt3.24□□□□□ -1.89
RRP40Q08285 SPT16YGL207W 3108 nt3.24□□□□□ -1.89
RRP40Q08285 MDN1YLR106C 14733 nt3.24□□□□□ -1.89
RRP40Q08285 MNR2YKL064W 2910 nt3.23□□□□□ -1.89
RRP40Q08285 CUS1YMR240C 1311 nt3.23□□□□□ -1.89
RRP40Q08285 RSF2YJR127C 4143 nt3.23□□□□□ -1.89
RRP40Q08285 YPR022CYPR022C 3402 nt3.23□□□□□ -1.89
RRP40Q08285 YCL068CYCL068C 783 nt3.23□□□□□ -1.89
RRP40Q08285 BUD30YDL151C 582 nt3.23□□□□□ -1.89
RRP40Q08285 RTN1YDR233C 888 nt3.23□□□□□ -1.89
RRP40Q08285 MMS21YEL019C 804 nt3.23□□□□□ -1.89
RRP40Q08285 YER039C-AYER039C-A 219 nt3.23□□□□□ -1.89
RRP40Q08285 COS8YHL048W 1146 nt3.23□□□□□ -1.89
RRP40Q08285 CIT1YNR001C 1440 nt3.23□□□□□ -1.89
RRP40Q08285 CNS1YBR155W 1158 nt3.23□□□□□ -1.89
RRP40Q08285 KAP95YLR347C 2586 nt3.23□□□□□ -1.89
RRP40Q08285 URC2YDR520C 2319 nt3.22□□□□□ -1.89
RRP40Q08285 BMS1YPL217C 3552 nt3.22□□□□□ -1.89
RRP40Q08285 RTT109YLL002W 1311 nt3.22□□□□□ -1.89
RRP40Q08285 ECO1YFR027W 846 nt3.22□□□□□ -1.89
RRP40Q08285 ERG26YGL001C 1050 nt3.22□□□□□ -1.89
RRP40Q08285 tV(CAC)DtV(CAC)D 73 nt3.22□□□□□ -1.89
RRP40Q08285 tV(CAC)HtV(CAC)H 73 nt3.22□□□□□ -1.89
RRP40Q08285 FMC1YIL098C 468 nt3.22□□□□□ -1.89
RRP40Q08285 CDC73YLR418C 1182 nt3.22□□□□□ -1.89
RRP40Q08285 IMP4YNL075W 873 nt3.22□□□□□ -1.89
RRP40Q08285 AIM41YOR215C 558 nt3.22□□□□□ -1.89
RRP40Q08285 BAR1YIL015W 1764 nt3.22□□□□□ -1.89
RRP40Q08285 FCF1YDR339C 570 nt3.21□□□□□ -1.9
RRP40Q08285 YKL071WYKL071W 771 nt3.21□□□□□ -1.9
RRP40Q08285 YKL177WYKL177W 339 nt3.21□□□□□ -1.9
RRP40Q08285 CDA2YLR308W 939 nt3.21□□□□□ -1.9
RRP40Q08285 RUF21RUF21 707 nt3.21□□□□□ -1.9
RRP40Q08285 YPR108W-AYPR108W-A 213 nt3.21□□□□□ -1.9
RRP40Q08285 YHL012WYHL012W 1482 nt3.21□□□□□ -1.9
RRP40Q08285 PWP2YCR057C 2772 nt3.2□□□□□ -1.9
RRP40Q08285 RAD4YER162C 2265 nt3.2□□□□□ -1.9
RRP40Q08285 RRP17YDR412W 708 nt3.2□□□□□ -1.9
RRP40Q08285 YER147C-AYER147C-A 411 nt3.2□□□□□ -1.9
RRP40Q08285 RIF1YBR275C 5751 nt3.2□□□□□ -1.9
RRP40Q08285 ORC4YPR162C 1590 nt3.2□□□□□ -1.9
RRP40Q08285 MTH1YDR277C 1302 nt3.19□□□□□ -1.9
RRP40Q08285 SHQ1YIL104C 1524 nt3.19□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms