Protein–RNA interactions for Protein: Q07953

SDO1, Ribosome maturation protein SDO1, yeastyeast

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDO1Q07953 ARO7YPR060C 771 nt3.24□□□□□ -1.89
SDO1Q07953 FAS1YKL182W 6156 nt3.24□□□□□ -1.89
SDO1Q07953 YAK1YJL141C 2424 nt3.24□□□□□ -1.89
SDO1Q07953 RAD5YLR032W 3510 nt3.24□□□□□ -1.89
SDO1Q07953 ASI1YMR119W 1875 nt3.24□□□□□ -1.89
SDO1Q07953 MSA1YOR066W 1890 nt3.24□□□□□ -1.89
SDO1Q07953 GYP6YJL044C 1377 nt3.24□□□□□ -1.89
SDO1Q07953 YIG1YPL201C 1386 nt3.24□□□□□ -1.89
SDO1Q07953 RSC1YGR056W 2787 nt3.23□□□□□ -1.89
SDO1Q07953 YDR230WYDR230W 348 nt3.23□□□□□ -1.89
SDO1Q07953 PEX21YGR239C 867 nt3.23□□□□□ -1.89
SDO1Q07953 YMR010WYMR010W 1218 nt3.23□□□□□ -1.89
SDO1Q07953 DIB1YPR082C 432 nt3.23□□□□□ -1.89
SDO1Q07953 HPA2YPR193C 471 nt3.23□□□□□ -1.89
SDO1Q07953 AIP1YMR092C 1848 nt3.23□□□□□ -1.89
SDO1Q07953 FLO9YAL063C 3969 nt3.23□□□□□ -1.89
SDO1Q07953 BAR1YIL015W 1764 nt3.23□□□□□ -1.89
SDO1Q07953 PFK26YIL107C 2484 nt3.22□□□□□ -1.89
SDO1Q07953 TOP1YOL006C 2310 nt3.22□□□□□ -1.89
SDO1Q07953 PRP22YER013W 3438 nt3.22□□□□□ -1.89
SDO1Q07953 PDS1YDR113C 1122 nt3.22□□□□□ -1.89
SDO1Q07953 YIL089WYIL089W 618 nt3.22□□□□□ -1.89
SDO1Q07953 CNB1YKL190W 528 nt3.22□□□□□ -1.89
SDO1Q07953 OSW1YOR255W 837 nt3.22□□□□□ -1.89
SDO1Q07953 DSS4YPR017C 432 nt3.22□□□□□ -1.89
SDO1Q07953 SPN1YPR133C 1233 nt3.22□□□□□ -1.89
SDO1Q07953 RSC58YLR033W 1509 nt3.22□□□□□ -1.89
SDO1Q07953 SPA2YLL021W 4401 nt3.22□□□□□ -1.89
SDO1Q07953 YPK3YBR028C 1578 nt3.21□□□□□ -1.89
SDO1Q07953 SMC3YJL074C 3693 nt3.21□□□□□ -1.9
SDO1Q07953 MIG1YGL035C 1515 nt3.21□□□□□ -1.9
SDO1Q07953 YMR018WYMR018W 1545 nt3.21□□□□□ -1.9
SDO1Q07953 MSS2YDL107W 1056 nt3.21□□□□□ -1.9
SDO1Q07953 FCF1YDR339C 570 nt3.21□□□□□ -1.9
SDO1Q07953 tR(ACG)JtR(ACG)J 73 nt3.21□□□□□ -1.9
SDO1Q07953 MRPL49YJL096W 486 nt3.21□□□□□ -1.9
SDO1Q07953 YOR238WYOR238W 912 nt3.21□□□□□ -1.9
SDO1Q07953 RPS11BYBR048W 471 nt3.21□□□□□ -1.9
SDO1Q07953 MSK1YNL073W 1731 nt3.21□□□□□ -1.9
SDO1Q07953 LYP1YNL268W 1836 nt3.21□□□□□ -1.9
SDO1Q07953 RTT109YLL002W 1311 nt3.2□□□□□ -1.9
SDO1Q07953 SAS4YDR181C 1446 nt3.2□□□□□ -1.9
SDO1Q07953 USA1YML029W 2517 nt3.2□□□□□ -1.9
SDO1Q07953 YBR225WYBR225W 2703 nt3.2□□□□□ -1.9
SDO1Q07953 YDL242WYDL242W 354 nt3.2□□□□□ -1.9
SDO1Q07953 FRQ1YDR373W 573 nt3.2□□□□□ -1.9
SDO1Q07953 API2YDR525W 330 nt3.2□□□□□ -1.9
SDO1Q07953 YGR219WYGR219W 342 nt3.2□□□□□ -1.9
SDO1Q07953 tX(XXX)DtX(XXX)D 100 nt3.2□□□□□ -1.9
SDO1Q07953 PER33YLR064W 822 nt3.2□□□□□ -1.9
SDO1Q07953 MCM1YMR043W 861 nt3.2□□□□□ -1.9
SDO1Q07953 YNR042WYNR042W 429 nt3.2□□□□□ -1.9
SDO1Q07953 UAF30YOR295W 687 nt3.2□□□□□ -1.9
SDO1Q07953 YOR338WYOR338W 1092 nt3.2□□□□□ -1.9
SDO1Q07953 VPS28YPL065W 729 nt3.2□□□□□ -1.9
SDO1Q07953 CLG1YGL215W 1359 nt3.2□□□□□ -1.9
SDO1Q07953 STP1YDR463W 1560 nt3.2□□□□□ -1.9
SDO1Q07953 ARO1YDR127W 4767 nt3.2□□□□□ -1.9
SDO1Q07953 YGR027W-BYGR027W-B 5268 nt3.19□□□□□ -1.9
SDO1Q07953 YLR227W-BYLR227W-B 5268 nt3.19□□□□□ -1.9
SDO1Q07953 YPR158C-DYPR158C-D 5268 nt3.19□□□□□ -1.9
SDO1Q07953 GRX3YDR098C 858 nt3.19□□□□□ -1.9
SDO1Q07953 YML116W-AYML116W-A 303 nt3.19□□□□□ -1.9
SDO1Q07953 PFA4YOL003C 1137 nt3.19□□□□□ -1.9
SDO1Q07953 YPL278CYPL278C 303 nt3.19□□□□□ -1.9
SDO1Q07953 YBR096WYBR096W 693 nt3.19□□□□□ -1.9
SDO1Q07953 YPR148CYPR148C 1308 nt3.19□□□□□ -1.9
SDO1Q07953 STT4YLR305C 5703 nt3.18□□□□□ -1.9
SDO1Q07953 TRX3YCR083W 384 nt3.18□□□□□ -1.9
SDO1Q07953 MAG1YER142C 891 nt3.18□□□□□ -1.9
SDO1Q07953 LIF1YGL090W 1266 nt3.18□□□□□ -1.9
SDO1Q07953 CAB2YIL083C 1098 nt3.18□□□□□ -1.9
SDO1Q07953 YIR040CYIR040C 333 nt3.18□□□□□ -1.9
SDO1Q07953 YJR111CYJR111C 852 nt3.18□□□□□ -1.9
SDO1Q07953 AUR1YKL004W 1206 nt3.18□□□□□ -1.9
SDO1Q07953 YAL056C-AYAL056C-A 351 nt3.18□□□□□ -1.9
SDO1Q07953 RPS28BYLR264W 204 nt3.18□□□□□ -1.9
SDO1Q07953 SHH3YMR118C 591 nt3.18□□□□□ -1.9
SDO1Q07953 RGS2YOR107W 930 nt3.18□□□□□ -1.9
SDO1Q07953 YBR016WYBR016W 387 nt3.18□□□□□ -1.9
SDO1Q07953 SLX1YBR228W 915 nt3.18□□□□□ -1.9
SDO1Q07953 URA2YJL130C 6645 nt3.18□□□□□ -1.9
SDO1Q07953 MGR3YMR115W 1506 nt3.18□□□□□ -1.9
SDO1Q07953 SDS23YGL056C 1584 nt3.17□□□□□ -1.9
SDO1Q07953 CHK1YBR274W 1584 nt3.17□□□□□ -1.9
SDO1Q07953 FRE4YNR060W 2160 nt3.17□□□□□ -1.9
SDO1Q07953 snR57snR57 88 nt3.17□□□□□ -1.9
SDO1Q07953 QRI7YDL104C 1224 nt3.17□□□□□ -1.9
SDO1Q07953 SHU2YDR078C 672 nt3.17□□□□□ -1.9
SDO1Q07953 PAD1YDR538W 729 nt3.17□□□□□ -1.9
SDO1Q07953 YGR026WYGR026W 837 nt3.17□□□□□ -1.9
SDO1Q07953 YIR014WYIR014W 729 nt3.17□□□□□ -1.9
SDO1Q07953 CCS1YMR038C 750 nt3.17□□□□□ -1.9
SDO1Q07953 RPL13BYMR142C 600 nt3.17□□□□□ -1.9
SDO1Q07953 RPS7AYOR096W 573 nt3.17□□□□□ -1.9
SDO1Q07953 CCM1YGR150C 2595 nt3.17□□□□□ -1.9
SDO1Q07953 ACK1YDL203C 1872 nt3.17□□□□□ -1.9
SDO1Q07953 ERG9YHR190W 1335 nt3.17□□□□□ -1.9
SDO1Q07953 DPH6YLR143W 2058 nt3.16□□□□□ -1.9
SDO1Q07953 TAF1YGR274C 3201 nt3.16□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms