Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 THI5YFL058W 1023 nt5.33□□□□□ -1.56
UBP3Q01477 YGL006W-AYGL006W-A 111 nt5.33□□□□□ -1.56
UBP3Q01477 YGR269WYGR269W 327 nt5.33□□□□□ -1.56
UBP3Q01477 YJL147CYJL147C 1149 nt5.33□□□□□ -1.56
UBP3Q01477 MNN11YJL183W 1269 nt5.33□□□□□ -1.56
UBP3Q01477 THI12YNL332W 1023 nt5.33□□□□□ -1.56
UBP3Q01477 ARF3YOR094W 552 nt5.33□□□□□ -1.56
UBP3Q01477 PET123YOR158W 957 nt5.33□□□□□ -1.56
UBP3Q01477 YBR126W-AYBR126W-A 207 nt5.33□□□□□ -1.56
UBP3Q01477 MSC7YHR039C 1935 nt5.33□□□□□ -1.56
UBP3Q01477 CDC4YFL009W 2340 nt5.32□□□□□ -1.56
UBP3Q01477 ADE6YGR061C 4077 nt5.32□□□□□ -1.56
UBP3Q01477 HES1YOR237W 1305 nt5.32□□□□□ -1.56
UBP3Q01477 SRS2YJL092W 3525 nt5.32□□□□□ -1.56
UBP3Q01477 TYW3YGL050W 822 nt5.32□□□□□ -1.56
UBP3Q01477 PRP18YGR006W 756 nt5.32□□□□□ -1.56
UBP3Q01477 LIN1YHR156C 1023 nt5.32□□□□□ -1.56
UBP3Q01477 RPI1YIL119C 1224 nt5.32□□□□□ -1.56
UBP3Q01477 YJR141WYJR141W 1044 nt5.32□□□□□ -1.56
UBP3Q01477 VPS69YPR087W 321 nt5.32□□□□□ -1.56
UBP3Q01477 YPR170W-AYPR170W-A 186 nt5.32□□□□□ -1.56
UBP3Q01477 POP7YBR167C 423 nt5.32□□□□□ -1.56
UBP3Q01477 YTA6YPL074W 2265 nt5.32□□□□□ -1.56
UBP3Q01477 GLN4YOR168W 2430 nt5.32□□□□□ -1.56
UBP3Q01477 AGA1YNR044W 2178 nt5.31□□□□□ -1.56 RIP-Chip
UBP3Q01477 YER084W-AYER084W-A 513 nt5.31□□□□□ -1.56
UBP3Q01477 SCS2YER120W 735 nt5.31□□□□□ -1.56
UBP3Q01477 ZRT1YGL255W 1131 nt5.31□□□□□ -1.56
UBP3Q01477 YGR126WYGR126W 693 nt5.31□□□□□ -1.56
UBP3Q01477 YHC1YLR298C 696 nt5.31□□□□□ -1.56
UBP3Q01477 MCM1YMR043W 861 nt5.31□□□□□ -1.56
UBP3Q01477 INA17YPL099C 549 nt5.31□□□□□ -1.56
UBP3Q01477 PHO13YDL236W 939 nt5.3□□□□□ -1.56
UBP3Q01477 RUB1YDR139C 234 nt5.3□□□□□ -1.56
UBP3Q01477 YGL159WYGL159W 1113 nt5.3□□□□□ -1.56
UBP3Q01477 YJL114WYJL114W 681 nt5.3□□□□□ -1.56
UBP3Q01477 YPT52YKR014C 705 nt5.3□□□□□ -1.56
UBP3Q01477 YLR444CYLR444C 303 nt5.3□□□□□ -1.56
UBP3Q01477 YML047W-AYML047W-A 366 nt5.3□□□□□ -1.56
UBP3Q01477 YNL277W-AYNL277W-A 189 nt5.3□□□□□ -1.56
UBP3Q01477 SYC1YOR179C 567 nt5.3□□□□□ -1.56
UBP3Q01477 YPL205CYPL205C 345 nt5.3□□□□□ -1.56
UBP3Q01477 RRG8YPR116W 834 nt5.3□□□□□ -1.56
UBP3Q01477 BBC1YJL020C 3474 nt5.3□□□□□ -1.56
UBP3Q01477 RGL1YPL066W 1440 nt5.3□□□□□ -1.56
UBP3Q01477 YIG1YPL201C 1386 nt5.29□□□□□ -1.56
UBP3Q01477 UGA3YDL170W 1587 nt5.29□□□□□ -1.56
UBP3Q01477 SMP3YOR149C 1551 nt5.29□□□□□ -1.56
UBP3Q01477 PRP43YGL120C 2304 nt5.29□□□□□ -1.56 RIP-Chip
UBP3Q01477 CDC48YDL126C 2508 nt5.29□□□□□ -1.56
UBP3Q01477 RSC6YCR052W 1452 nt5.29□□□□□ -1.56
UBP3Q01477 RTR1YER139C 681 nt5.29□□□□□ -1.56
UBP3Q01477 CNN1YFR046C 1086 nt5.29□□□□□ -1.56
UBP3Q01477 MRF1YGL143C 1242 nt5.29□□□□□ -1.56
UBP3Q01477 HTA2YBL003C 399 nt5.29□□□□□ -1.56
UBP3Q01477 DGA1YOR245C 1257 nt5.29□□□□□ -1.56
UBP3Q01477 MET31YPL038W 534 nt5.29□□□□□ -1.56
UBP3Q01477 SPC29YPL124W 762 nt5.29□□□□□ -1.56
UBP3Q01477 TOM5YPR133W-A 153 nt5.29□□□□□ -1.56
UBP3Q01477 IDS2YJL146W 1410 nt5.29□□□□□ -1.56
UBP3Q01477 TDA6YPR157W 1404 nt5.29□□□□□ -1.56
UBP3Q01477 YOR1YGR281W 4434 nt5.29□□□□□ -1.56 RIP-Chip
UBP3Q01477 PUT2YHR037W 1728 nt5.28□□□□□ -1.56
UBP3Q01477 ORC6YHR118C 1308 nt5.28□□□□□ -1.56
UBP3Q01477 HXT14YNL318C 1623 nt5.28□□□□□ -1.56
UBP3Q01477 YGL109WYGL109W 324 nt5.28□□□□□ -1.56
UBP3Q01477 SCM4YGR049W 564 nt5.28□□□□□ -1.56
UBP3Q01477 UPF3YGR072W 1164 nt5.28□□□□□ -1.56
UBP3Q01477 SVP26YHR181W 687 nt5.28□□□□□ -1.56
UBP3Q01477 YJL007CYJL007C 315 nt5.28□□□□□ -1.56
UBP3Q01477 THI11YJR156C 1023 nt5.28□□□□□ -1.56
UBP3Q01477 KTR2YKR061W 1278 nt5.28□□□□□ -1.56
UBP3Q01477 YLR347W-AYLR347W-A 141 nt5.28□□□□□ -1.56
UBP3Q01477 SAM37YMR060C 984 nt5.28□□□□□ -1.56
UBP3Q01477 MDG1YNL173C 1101 nt5.28□□□□□ -1.56 RIP-Chip
UBP3Q01477 RCL1YOL010W 1104 nt5.28□□□□□ -1.56
UBP3Q01477 HSH49YOR319W 642 nt5.28□□□□□ -1.56
UBP3Q01477 MEI5YPL121C 669 nt5.28□□□□□ -1.56
UBP3Q01477 OXR1YPL196W 822 nt5.28□□□□□ -1.56
UBP3Q01477 STP4YDL048C 1473 nt5.27□□□□□ -1.57 RIP-Chip
UBP3Q01477 YCR085WYCR085W 354 nt5.27□□□□□ -1.57
UBP3Q01477 MXR1YER042W 555 nt5.27□□□□□ -1.57
UBP3Q01477 YGR109W-AYGR109W-A 873 nt5.27□□□□□ -1.57
UBP3Q01477 MRP4YHL004W 1185 nt5.27□□□□□ -1.57
UBP3Q01477 BNA1YJR025C 534 nt5.27□□□□□ -1.57
UBP3Q01477 SFT1YKL006C-A 294 nt5.27□□□□□ -1.57
UBP3Q01477 YKL115CYKL115C 393 nt5.27□□□□□ -1.57
UBP3Q01477 SDH3YKL141W 597 nt5.27□□□□□ -1.57
UBP3Q01477 YNL035CYNL035C 1170 nt5.27□□□□□ -1.57
UBP3Q01477 TOM7YNL070W 183 nt5.27□□□□□ -1.57
UBP3Q01477 MIX23YBL107C 591 nt5.27□□□□□ -1.57
UBP3Q01477 RRG7YOR305W 729 nt5.27□□□□□ -1.57
UBP3Q01477 PEP4YPL154C 1218 nt5.27□□□□□ -1.57
UBP3Q01477 SYF1YDR416W 2580 nt5.27□□□□□ -1.57
UBP3Q01477 RTS1YOR014W 2274 nt5.27□□□□□ -1.57
UBP3Q01477 YGL176CYGL176C 1665 nt5.27□□□□□ -1.57
UBP3Q01477 MCH4YOL119C 1506 nt5.27□□□□□ -1.57
UBP3Q01477 TUB2YFL037W 1374 nt5.27□□□□□ -1.57 RIP-Chip
UBP3Q01477 FAA3YIL009W 2085 nt5.27□□□□□ -1.57 RIP-Chip
UBP3Q01477 SLC1YDL052C 912 nt5.26□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 66.2 ms