Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 URA4YLR420W 1095 nt3.98□□□□□ -1.77
RPA49Q01080 RPS9BYBR189W 588 nt3.98□□□□□ -1.77
RPA49Q01080 YVC1YOR087W 2028 nt3.98□□□□□ -1.77
RPA49Q01080 BUD5YCR038C 1929 nt3.97□□□□□ -1.77
RPA49Q01080 FKH2YNL068C 2589 nt3.97□□□□□ -1.77
RPA49Q01080 DPH1YIL103W 1278 nt3.97□□□□□ -1.77
RPA49Q01080 PAM18YLR008C 507 nt3.97□□□□□ -1.77
RPA49Q01080 YLR311CYLR311C 348 nt3.97□□□□□ -1.77
RPA49Q01080 FOL3YMR113W 1284 nt3.97□□□□□ -1.77
RPA49Q01080 MCM16YPR046W 546 nt3.97□□□□□ -1.77
RPA49Q01080 UBS1YBR165W 834 nt3.97□□□□□ -1.77
RPA49Q01080 DHR2YKL078W 2208 nt3.97□□□□□ -1.77
RPA49Q01080 HMG1YML075C 3165 nt3.96□□□□□ -1.77
RPA49Q01080 ATG26YLR189C 3597 nt3.96□□□□□ -1.78
RPA49Q01080 VHS3YOR054C 2025 nt3.96□□□□□ -1.78
RPA49Q01080 YGL108CYGL108C 423 nt3.96□□□□□ -1.78
RPA49Q01080 YGR051CYGR051C 324 nt3.96□□□□□ -1.78
RPA49Q01080 YHI9YHR029C 885 nt3.96□□□□□ -1.78
RPA49Q01080 COX19YLL018C-A 297 nt3.96□□□□□ -1.78
RPA49Q01080 SIC1YLR079W 855 nt3.96□□□□□ -1.78
RPA49Q01080 RPS10BYMR230W 318 nt3.96□□□□□ -1.78
RPA49Q01080 UTP23YOR004W 765 nt3.96□□□□□ -1.78
RPA49Q01080 TMC1YOR052C 453 nt3.96□□□□□ -1.78
RPA49Q01080 YOR186WYOR186W 435 nt3.96□□□□□ -1.78
RPA49Q01080 RPN8YOR261C 1017 nt3.96□□□□□ -1.78
RPA49Q01080 PRP9YDL030W 1593 nt3.96□□□□□ -1.78
RPA49Q01080 TRS85YDR108W 2097 nt3.96□□□□□ -1.78
RPA49Q01080 MLH2YLR035C 2088 nt3.96□□□□□ -1.78
RPA49Q01080 YBR238CYBR238C 2196 nt3.96□□□□□ -1.78
RPA49Q01080 PRP3YDR473C 1410 nt3.95□□□□□ -1.78
RPA49Q01080 VPS45YGL095C 1734 nt3.95□□□□□ -1.78
RPA49Q01080 NAT1YDL040C 2565 nt3.95□□□□□ -1.78
RPA49Q01080 GEM1YAL048C 1989 nt3.95□□□□□ -1.78
RPA49Q01080 MEK1YOR351C 1494 nt3.95□□□□□ -1.78
RPA49Q01080 YDL071CYDL071C 375 nt3.95□□□□□ -1.78
RPA49Q01080 SUP56tL(CAA)A 82 nt3.95□□□□□ -1.78
RPA49Q01080 SUP53tL(CAA)C 82 nt3.95□□□□□ -1.78
RPA49Q01080 tL(CAA)DtL(CAA)D 82 nt3.95□□□□□ -1.78
RPA49Q01080 tL(CAA)G1tL(CAA)G1 82 nt3.95□□□□□ -1.78
RPA49Q01080 SUP54tL(CAA)G2 82 nt3.95□□□□□ -1.78
RPA49Q01080 tL(CAA)G3tL(CAA)G3 82 nt3.95□□□□□ -1.78
RPA49Q01080 tL(CAA)KtL(CAA)K 82 nt3.95□□□□□ -1.78
RPA49Q01080 tL(CAA)LtL(CAA)L 82 nt3.95□□□□□ -1.78
RPA49Q01080 tL(CAA)MtL(CAA)M 82 nt3.95□□□□□ -1.78
RPA49Q01080 tL(CAA)NtL(CAA)N 82 nt3.95□□□□□ -1.78
RPA49Q01080 BMT5YIL096C 1011 nt3.95□□□□□ -1.78
RPA49Q01080 SGN1YIR001C 753 nt3.95□□□□□ -1.78
RPA49Q01080 YLR428CYLR428C 345 nt3.95□□□□□ -1.78
RPA49Q01080 EAF7YNL136W 1278 nt3.95□□□□□ -1.78
RPA49Q01080 YBL096CYBL096C 309 nt3.95□□□□□ -1.78
RPA49Q01080 HPA2YPR193C 471 nt3.95□□□□□ -1.78
RPA49Q01080 YSH1YLR277C 2340 nt3.95□□□□□ -1.78
RPA49Q01080 VID28YIL017C 2766 nt3.95□□□□□ -1.78
RPA49Q01080 RDS1YCR106W 2499 nt3.94□□□□□ -1.78
RPA49Q01080 TPD3YAL016W 1908 nt3.94□□□□□ -1.78
RPA49Q01080 TRM12YML005W 1389 nt3.94□□□□□ -1.78
RPA49Q01080 HOM2YDR158W 1098 nt3.94□□□□□ -1.78
RPA49Q01080 RNH202YDR279W 1053 nt3.94□□□□□ -1.78
RPA49Q01080 HAT2YEL056W 1206 nt3.94□□□□□ -1.78
RPA49Q01080 COX4YGL187C 468 nt3.94□□□□□ -1.78
RPA49Q01080 YLR154W-BYLR154W-B 165 nt3.94□□□□□ -1.78
RPA49Q01080 YML053CYML053C 639 nt3.94□□□□□ -1.78
RPA49Q01080 PIM1YBL022C 3402 nt3.93□□□□□ -1.78
RPA49Q01080 YCR024C-BYCR024C-B 267 nt3.93□□□□□ -1.78
RPA49Q01080 YJR056CYJR056C 711 nt3.93□□□□□ -1.78
RPA49Q01080 ATG16YMR159C 453 nt3.93□□□□□ -1.78
RPA49Q01080 RUF21RUF21 707 nt3.93□□□□□ -1.78
RPA49Q01080 OSW1YOR255W 837 nt3.93□□□□□ -1.78
RPA49Q01080 HSH49YOR319W 642 nt3.93□□□□□ -1.78
RPA49Q01080 USV1YPL230W 1176 nt3.93□□□□□ -1.78
RPA49Q01080 LDH1YBR204C 1128 nt3.93□□□□□ -1.78
RPA49Q01080 POF1YCL047C 777 nt3.93□□□□□ -1.78
RPA49Q01080 DBP5YOR046C 1449 nt3.93□□□□□ -1.78
RPA49Q01080 RSC3YDR303C 2658 nt3.93□□□□□ -1.78
RPA49Q01080 ECM16YMR128W 3804 nt3.93□□□□□ -1.78
RPA49Q01080 AEP3YPL005W 1821 nt3.93□□□□□ -1.78
RPA49Q01080 PTM1YKL039W 1572 nt3.93□□□□□ -1.78
RPA49Q01080 ULS1YOR191W 4860 nt3.93□□□□□ -1.78
RPA49Q01080 GCD1YOR260W 1737 nt3.92□□□□□ -1.78
RPA49Q01080 SLA1YBL007C 3735 nt3.92□□□□□ -1.78
RPA49Q01080 DIP2YLR129W 2832 nt3.92□□□□□ -1.78
RPA49Q01080 UTP25YIL091C 2166 nt3.92□□□□□ -1.78
RPA49Q01080 RPO21YDL140C 5202 nt3.92□□□□□ -1.78
RPA49Q01080 IMH1YLR309C 2736 nt3.92□□□□□ -1.78
RPA49Q01080 YDR271CYDR271C 372 nt3.92□□□□□ -1.78
RPA49Q01080 PCL7YIL050W 858 nt3.92□□□□□ -1.78
RPA49Q01080 HMX1YLR205C 954 nt3.92□□□□□ -1.78
RPA49Q01080 MAP1YLR244C 1164 nt3.92□□□□□ -1.78
RPA49Q01080 YPT53YNL093W 663 nt3.92□□□□□ -1.78
RPA49Q01080 IZH4YOL101C 939 nt3.92□□□□□ -1.78
RPA49Q01080 BAG7YOR134W 1230 nt3.92□□□□□ -1.78
RPA49Q01080 CDC45YLR103C 1953 nt3.92□□□□□ -1.78
RPA49Q01080 RRN11YML043C 1524 nt3.91□□□□□ -1.78
RPA49Q01080 CEX1YOR112W 2286 nt3.91□□□□□ -1.78
RPA49Q01080 AAD3YCR107W 1092 nt3.91□□□□□ -1.78
RPA49Q01080 RPN4YDL020C 1596 nt3.91□□□□□ -1.78
RPA49Q01080 BSC2YDR275W 708 nt3.91□□□□□ -1.78
RPA49Q01080 YGL188CYGL188C 174 nt3.91□□□□□ -1.78
RPA49Q01080 YGR026WYGR026W 837 nt3.91□□□□□ -1.78
RPA49Q01080 YGR168CYGR168C 1131 nt3.91□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 38.3 ms