Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.42■□□□□ 0.7
CLDN18P56856 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.42■□□□□ 0.7
CLDN18P56856 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN18P56856 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN18P56856 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN18P56856 C9orf163-202ENST00000624034 2573 ntBASIC19.41■□□□□ 0.7
CLDN18P56856 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CLDN18P56856 LINC00526-201ENST00000581067 1875 ntBASIC19.41■□□□□ 0.7
CLDN18P56856 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN18P56856 AC137767.1-201ENST00000602918 1920 ntBASIC19.41■□□□□ 0.7
CLDN18P56856 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN18P56856 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN18P56856 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN18P56856 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN18P56856 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN18P56856 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN18P56856 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN18P56856 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLDN18P56856 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.41■□□□□ 0.7
CLDN18P56856 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN18P56856 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.41■□□□□ 0.7
CLDN18P56856 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.41■□□□□ 0.7
CLDN18P56856 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN18P56856 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN18P56856 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN18P56856 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CLDN18P56856 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN18P56856 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN18P56856 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.4■□□□□ 0.7
CLDN18P56856 AC092666.2-201ENST00000613287 246 ntBASIC19.4■□□□□ 0.7
CLDN18P56856 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLDN18P56856 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN18P56856 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN18P56856 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLDN18P56856 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.4■□□□□ 0.7
CLDN18P56856 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CLDN18P56856 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN18P56856 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN18P56856 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN18P56856 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN18P56856 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN18P56856 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.39■□□□□ 0.69
CLDN18P56856 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN18P56856 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLDN18P56856 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.39■□□□□ 0.69
CLDN18P56856 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN18P56856 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN18P56856 OR7E47P-201ENST00000546390 1422 ntBASIC19.39■□□□□ 0.69
CLDN18P56856 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN18P56856 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN18P56856 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.39■□□□□ 0.69
CLDN18P56856 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.39■□□□□ 0.69
CLDN18P56856 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN18P56856 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN18P56856 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLDN18P56856 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN18P56856 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLDN18P56856 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN18P56856 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN18P56856 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.38■□□□□ 0.69
CLDN18P56856 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN18P56856 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN18P56856 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN18P56856 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN18P56856 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN18P56856 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN18P56856 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLDN18P56856 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CLDN18P56856 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN18P56856 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CLDN18P56856 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN18P56856 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN18P56856 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN18P56856 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN18P56856 AC009237.3-201ENST00000393279 1427 ntBASIC19.37■□□□□ 0.69
CLDN18P56856 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN18P56856 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.37■□□□□ 0.69
CLDN18P56856 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CLDN18P56856 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN18P56856 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN18P56856 NTF6G-201ENST00000591094 616 ntBASIC19.37■□□□□ 0.69
CLDN18P56856 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CLDN18P56856 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN18P56856 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN18P56856 C1orf229-201ENST00000623686 2258 ntBASIC19.37■□□□□ 0.69
CLDN18P56856 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN18P56856 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.37■□□□□ 0.69
CLDN18P56856 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN18P56856 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN18P56856 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLDN18P56856 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN18P56856 AC005224.4-201ENST00000583262 1652 ntBASIC19.36■□□□□ 0.69
CLDN18P56856 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN18P56856 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN18P56856 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN18P56856 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN18P56856 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN18P56856 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLDN18P56856 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.36■□□□□ 0.69
CLDN18P56856 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 343.7 ms