Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.49■□□□□ 0.71
GFRA1P56159 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFRA1P56159 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
GFRA1P56159 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFRA1P56159 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFRA1P56159 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.49■□□□□ 0.71
GFRA1P56159 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.49■□□□□ 0.71
GFRA1P56159 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFRA1P56159 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFRA1P56159 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.49■□□□□ 0.71
GFRA1P56159 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.48■□□□□ 0.71
GFRA1P56159 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA1P56159 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA1P56159 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.48■□□□□ 0.71
GFRA1P56159 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
GFRA1P56159 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.48■□□□□ 0.71
GFRA1P56159 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA1P56159 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA1P56159 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFRA1P56159 C1orf229-201ENST00000623686 2258 ntBASIC19.48■□□□□ 0.71
GFRA1P56159 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA1P56159 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA1P56159 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.47■□□□□ 0.71
GFRA1P56159 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA1P56159 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.47■□□□□ 0.71
GFRA1P56159 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA1P56159 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA1P56159 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.47■□□□□ 0.71
GFRA1P56159 KRT18P5-201ENST00000436075 1291 ntBASIC19.47■□□□□ 0.71
GFRA1P56159 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
GFRA1P56159 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.47■□□□□ 0.71
GFRA1P56159 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.47■□□□□ 0.71
GFRA1P56159 AC104564.3-201ENST00000582367 638 ntBASIC19.47■□□□□ 0.71
GFRA1P56159 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.47■□□□□ 0.71
GFRA1P56159 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.47■□□□□ 0.71
GFRA1P56159 OR7E47P-201ENST00000546390 1422 ntBASIC19.47■□□□□ 0.71
GFRA1P56159 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA1P56159 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFRA1P56159 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA1P56159 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.46■□□□□ 0.71
GFRA1P56159 ESRRAP2-201ENST00000418437 1549 ntBASIC19.46■□□□□ 0.71
GFRA1P56159 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.46■□□□□ 0.71
GFRA1P56159 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA1P56159 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA1P56159 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA1P56159 AC009237.3-201ENST00000393279 1427 ntBASIC19.46■□□□□ 0.71
GFRA1P56159 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.46■□□□□ 0.71
GFRA1P56159 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
GFRA1P56159 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.46■□□□□ 0.71
GFRA1P56159 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA1P56159 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.46■□□□□ 0.71
GFRA1P56159 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
GFRA1P56159 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.46■□□□□ 0.71
GFRA1P56159 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.46■□□□□ 0.71
GFRA1P56159 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA1P56159 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA1P56159 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA1P56159 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA1P56159 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFRA1P56159 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.45■□□□□ 0.7
GFRA1P56159 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA1P56159 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA1P56159 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA1P56159 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.45■□□□□ 0.7
GFRA1P56159 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA1P56159 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA1P56159 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
GFRA1P56159 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.45■□□□□ 0.7
GFRA1P56159 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA1P56159 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GFRA1P56159 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.45■□□□□ 0.7
GFRA1P56159 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GFRA1P56159 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
GFRA1P56159 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.45■□□□□ 0.7
GFRA1P56159 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA1P56159 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFRA1P56159 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.45■□□□□ 0.7
GFRA1P56159 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA1P56159 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA1P56159 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.44■□□□□ 0.7
GFRA1P56159 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA1P56159 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA1P56159 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA1P56159 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA1P56159 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GFRA1P56159 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA1P56159 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA1P56159 AC005224.4-201ENST00000583262 1652 ntBASIC19.44■□□□□ 0.7
GFRA1P56159 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA1P56159 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA1P56159 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA1P56159 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.44■□□□□ 0.7
GFRA1P56159 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.44■□□□□ 0.7
GFRA1P56159 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA1P56159 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA1P56159 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFRA1P56159 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
GFRA1P56159 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.43■□□□□ 0.7
GFRA1P56159 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFRA1P56159 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms