Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CDH13P55290 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.18■□□□□ 0.98
CDH13P55290 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CDH13P55290 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH13P55290 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH13P55290 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.18■□□□□ 0.98
CDH13P55290 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CDH13P55290 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH13P55290 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH13P55290 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CDH13P55290 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH13P55290 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH13P55290 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH13P55290 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.17■□□□□ 0.98
CDH13P55290 AL356740.2-201ENST00000601559 647 ntBASIC21.17■□□□□ 0.98
CDH13P55290 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.17■□□□□ 0.98
CDH13P55290 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.17■□□□□ 0.98
CDH13P55290 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH13P55290 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH13P55290 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH13P55290 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH13P55290 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH13P55290 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDH13P55290 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH13P55290 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH13P55290 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDH13P55290 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.16■□□□□ 0.98
CDH13P55290 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.16■□□□□ 0.98
CDH13P55290 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH13P55290 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH13P55290 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH13P55290 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH13P55290 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH13P55290 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.15■□□□□ 0.98
CDH13P55290 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.15■□□□□ 0.98
CDH13P55290 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH13P55290 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH13P55290 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.15■□□□□ 0.98
CDH13P55290 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.15■□□□□ 0.98
CDH13P55290 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH13P55290 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.15■□□□□ 0.98
CDH13P55290 MIR3621-201ENST00000580529 85 ntBASIC21.15■□□□□ 0.98
CDH13P55290 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CDH13P55290 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH13P55290 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH13P55290 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDH13P55290 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH13P55290 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH13P55290 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDH13P55290 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH13P55290 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH13P55290 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH13P55290 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH13P55290 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDH13P55290 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.14■□□□□ 0.97
CDH13P55290 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH13P55290 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH13P55290 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDH13P55290 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
CDH13P55290 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.14■□□□□ 0.97
CDH13P55290 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.13■□□□□ 0.97
CDH13P55290 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDH13P55290 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH13P55290 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDH13P55290 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CDH13P55290 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH13P55290 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH13P55290 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH13P55290 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDH13P55290 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH13P55290 AL031602.1-201ENST00000633169 911 ntBASIC21.13■□□□□ 0.97
CDH13P55290 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH13P55290 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH13P55290 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDH13P55290 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
CDH13P55290 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH13P55290 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH13P55290 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CDH13P55290 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH13P55290 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH13P55290 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH13P55290 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.12■□□□□ 0.97
CDH13P55290 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH13P55290 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CDH13P55290 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH13P55290 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH13P55290 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH13P55290 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDH13P55290 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.12■□□□□ 0.97
CDH13P55290 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH13P55290 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH13P55290 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH13P55290 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH13P55290 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH13P55290 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH13P55290 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH13P55290 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDH13P55290 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH13P55290 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH13P55290 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms