Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.94■□□□□ 0.94
EPHA4P54764 AC079089.2-201ENST00000531211 1277 ntBASIC20.94■□□□□ 0.94
EPHA4P54764 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.94■□□□□ 0.94
EPHA4P54764 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA4P54764 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
EPHA4P54764 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA4P54764 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA4P54764 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA4P54764 AC133561.1-201ENST00000568600 2415 ntBASIC20.94■□□□□ 0.94
EPHA4P54764 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
EPHA4P54764 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA4P54764 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA4P54764 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA4P54764 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA4P54764 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.93■□□□□ 0.94
EPHA4P54764 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.93■□□□□ 0.94
EPHA4P54764 RARRES2P11-201ENST00000635158 484 ntBASIC20.93■□□□□ 0.94
EPHA4P54764 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA4P54764 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA4P54764 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA4P54764 AP004607.4-201ENST00000530158 1459 ntBASIC20.93■□□□□ 0.94
EPHA4P54764 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA4P54764 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.92■□□□□ 0.94
EPHA4P54764 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EPHA4P54764 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.92■□□□□ 0.94
EPHA4P54764 AC079140.4-201ENST00000507448 529 ntBASIC20.92■□□□□ 0.94
EPHA4P54764 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.92■□□□□ 0.94
EPHA4P54764 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EPHA4P54764 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
EPHA4P54764 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.92■□□□□ 0.94
EPHA4P54764 AC005224.4-201ENST00000583262 1652 ntBASIC20.92■□□□□ 0.94
EPHA4P54764 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
EPHA4P54764 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHA4P54764 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHA4P54764 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
EPHA4P54764 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.91■□□□□ 0.94
EPHA4P54764 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHA4P54764 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EPHA4P54764 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EPHA4P54764 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHA4P54764 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.91■□□□□ 0.94
EPHA4P54764 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.91■□□□□ 0.94
EPHA4P54764 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.91■□□□□ 0.94
EPHA4P54764 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.91■□□□□ 0.94
EPHA4P54764 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.91■□□□□ 0.94
EPHA4P54764 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.91■□□□□ 0.94
EPHA4P54764 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EPHA4P54764 KRT18P61-201ENST00000585825 1298 ntBASIC20.91■□□□□ 0.94
EPHA4P54764 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.91■□□□□ 0.94
EPHA4P54764 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EPHA4P54764 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.91■□□□□ 0.94
EPHA4P54764 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
EPHA4P54764 AC004854.2-201ENST00000608450 1441 ntBASIC20.9■□□□□ 0.94
EPHA4P54764 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EPHA4P54764 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.9■□□□□ 0.94
EPHA4P54764 KRT19P1-201ENST00000405746 1186 ntBASIC20.9■□□□□ 0.94
EPHA4P54764 AC004911.1-201ENST00000416316 871 ntBASIC20.9■□□□□ 0.94
EPHA4P54764 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.9■□□□□ 0.94
EPHA4P54764 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.9■□□□□ 0.94
EPHA4P54764 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EPHA4P54764 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.9■□□□□ 0.94
EPHA4P54764 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
EPHA4P54764 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EPHA4P54764 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
EPHA4P54764 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
EPHA4P54764 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EPHA4P54764 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
EPHA4P54764 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
EPHA4P54764 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
EPHA4P54764 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EPHA4P54764 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.89■□□□□ 0.93
EPHA4P54764 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.89■□□□□ 0.93
EPHA4P54764 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EPHA4P54764 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.89■□□□□ 0.93
EPHA4P54764 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
EPHA4P54764 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.88■□□□□ 0.93
EPHA4P54764 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EPHA4P54764 AC006015.1-201ENST00000429970 570 ntBASIC20.88■□□□□ 0.93
EPHA4P54764 AC090192.1-201ENST00000517740 490 ntBASIC20.88■□□□□ 0.93
EPHA4P54764 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
EPHA4P54764 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EPHA4P54764 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.88■□□□□ 0.93
EPHA4P54764 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EPHA4P54764 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA4P54764 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
EPHA4P54764 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA4P54764 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA4P54764 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA4P54764 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA4P54764 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA4P54764 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.87■□□□□ 0.93
EPHA4P54764 AC137761.2-201ENST00000561729 223 ntBASIC20.87■□□□□ 0.93
EPHA4P54764 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.87■□□□□ 0.93
EPHA4P54764 AC145350.3-201ENST00000569033 163 ntBASIC20.87■□□□□ 0.93
EPHA4P54764 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.87■□□□□ 0.93
EPHA4P54764 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.87■□□□□ 0.93
EPHA4P54764 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
EPHA4P54764 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA4P54764 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.87■□□□□ 0.93
EPHA4P54764 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms