Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NUBP1P53384 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NUBP1P53384 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NUBP1P53384 MTATP6P19-201ENST00000413797 659 ntBASIC21.81■■□□□ 1.08
NUBP1P53384 AC211429.1-201ENST00000415277 523 ntBASIC21.81■■□□□ 1.08
NUBP1P53384 BX276092.2-201ENST00000417668 665 ntBASIC21.81■■□□□ 1.08
NUBP1P53384 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NUBP1P53384 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NUBP1P53384 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.81■■□□□ 1.08
NUBP1P53384 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.81■■□□□ 1.08
NUBP1P53384 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.81■■□□□ 1.08
NUBP1P53384 AC073648.6-201ENST00000641589 218 ntBASIC21.81■■□□□ 1.08
NUBP1P53384 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.81■■□□□ 1.08
NUBP1P53384 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.81■■□□□ 1.08
NUBP1P53384 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.81■■□□□ 1.08
NUBP1P53384 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.8■■□□□ 1.08
NUBP1P53384 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NUBP1P53384 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
NUBP1P53384 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NUBP1P53384 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NUBP1P53384 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NUBP1P53384 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.8■■□□□ 1.08
NUBP1P53384 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NUBP1P53384 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.8■■□□□ 1.08
NUBP1P53384 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NUBP1P53384 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
NUBP1P53384 AC091874.3-201ENST00000512672 1195 ntBASIC21.8■■□□□ 1.08
NUBP1P53384 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.8■■□□□ 1.08
NUBP1P53384 UNC93B5-201ENST00000530315 699 ntBASIC21.8■■□□□ 1.08
NUBP1P53384 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.8■■□□□ 1.08
NUBP1P53384 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.8■■□□□ 1.08
NUBP1P53384 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.8■■□□□ 1.08
NUBP1P53384 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.8■■□□□ 1.08
NUBP1P53384 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.8■■□□□ 1.08
NUBP1P53384 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUBP1P53384 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.79■■□□□ 1.08
NUBP1P53384 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUBP1P53384 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUBP1P53384 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.79■■□□□ 1.08
NUBP1P53384 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.79■■□□□ 1.08
NUBP1P53384 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.79■■□□□ 1.08
NUBP1P53384 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
NUBP1P53384 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.79■■□□□ 1.08
NUBP1P53384 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.79■■□□□ 1.08
NUBP1P53384 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.79■■□□□ 1.08
NUBP1P53384 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
NUBP1P53384 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
NUBP1P53384 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NUBP1P53384 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
NUBP1P53384 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
NUBP1P53384 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NUBP1P53384 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUBP1P53384 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUBP1P53384 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUBP1P53384 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUBP1P53384 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.78■■□□□ 1.08
NUBP1P53384 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NUBP1P53384 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.78■■□□□ 1.08
NUBP1P53384 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NUBP1P53384 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.78■■□□□ 1.08
NUBP1P53384 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUBP1P53384 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.78■■□□□ 1.08
NUBP1P53384 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUBP1P53384 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUBP1P53384 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUBP1P53384 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUBP1P53384 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUBP1P53384 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.77■■□□□ 1.08
NUBP1P53384 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUBP1P53384 AP003097.1-201ENST00000530657 1135 ntBASIC21.77■■□□□ 1.08
NUBP1P53384 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.77■■□□□ 1.08
NUBP1P53384 AL359736.2-201ENST00000621992 437 ntBASIC21.77■■□□□ 1.08
NUBP1P53384 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.77■■□□□ 1.08
NUBP1P53384 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUBP1P53384 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NUBP1P53384 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUBP1P53384 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NUBP1P53384 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NUBP1P53384 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.76■■□□□ 1.07
NUBP1P53384 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.76■■□□□ 1.07
NUBP1P53384 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUBP1P53384 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.76■■□□□ 1.07
NUBP1P53384 AC092803.2-201ENST00000564287 1899 ntBASIC21.76■■□□□ 1.07
NUBP1P53384 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.76■■□□□ 1.07
NUBP1P53384 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUBP1P53384 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUBP1P53384 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUBP1P53384 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NUBP1P53384 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUBP1P53384 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.75■■□□□ 1.07
NUBP1P53384 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.75■■□□□ 1.07
NUBP1P53384 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.75■■□□□ 1.07
NUBP1P53384 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
NUBP1P53384 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NUBP1P53384 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUBP1P53384 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUBP1P53384 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUBP1P53384 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUBP1P53384 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUBP1P53384 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms