Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC25A1P53007 AC068587.7-201ENST00000641602 218 ntBASIC19.28■□□□□ 0.68
SLC25A1P53007 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC25A1P53007 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC25A1P53007 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC25A1P53007 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SLC25A1P53007 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC25A1P53007 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC25A1P53007 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC25A1P53007 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SLC25A1P53007 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC25A1P53007 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC25A1P53007 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC25A1P53007 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC25A1P53007 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC25A1P53007 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC25A1P53007 AC099791.2-201ENST00000605725 427 ntBASIC19.27■□□□□ 0.68
SLC25A1P53007 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC25A1P53007 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC25A1P53007 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC25A1P53007 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC25A1P53007 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.27■□□□□ 0.67
SLC25A1P53007 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC25A1P53007 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC25A1P53007 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC25A1P53007 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC25A1P53007 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC25A1P53007 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.27■□□□□ 0.67
SLC25A1P53007 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.27■□□□□ 0.67
SLC25A1P53007 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC25A1P53007 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC25A1P53007 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SLC25A1P53007 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC25A1P53007 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC25A1P53007 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC25A1P53007 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.26■□□□□ 0.67
SLC25A1P53007 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC25A1P53007 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC25A1P53007 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC25A1P53007 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC25A1P53007 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC25A1P53007 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC25A1P53007 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC25A1P53007 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC25A1P53007 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC25A1P53007 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC25A1P53007 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC25A1P53007 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC25A1P53007 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SLC25A1P53007 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC25A1P53007 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC25A1P53007 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SLC25A1P53007 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC25A1P53007 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC25A1P53007 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.25■□□□□ 0.67
SLC25A1P53007 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC25A1P53007 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC25A1P53007 MIR3621-201ENST00000580529 85 ntBASIC19.25■□□□□ 0.67
SLC25A1P53007 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC25A1P53007 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SLC25A1P53007 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC25A1P53007 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC25A1P53007 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC25A1P53007 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC25A1P53007 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
SLC25A1P53007 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC25A1P53007 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC25A1P53007 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC25A1P53007 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC25A1P53007 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC25A1P53007 OR2I1P-207ENST00000453522 948 ntBASIC19.24■□□□□ 0.67
SLC25A1P53007 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SLC25A1P53007 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC25A1P53007 MIR3181-201ENST00000578512 73 ntBASIC19.24■□□□□ 0.67
SLC25A1P53007 AL035685.1-201ENST00000636663 812 ntBASIC19.24■□□□□ 0.67
SLC25A1P53007 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC25A1P53007 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC25A1P53007 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.24■□□□□ 0.67
SLC25A1P53007 OR7E47P-201ENST00000546390 1422 ntBASIC19.24■□□□□ 0.67
SLC25A1P53007 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SLC25A1P53007 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SLC25A1P53007 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.24■□□□□ 0.67
SLC25A1P53007 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC25A1P53007 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC25A1P53007 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC25A1P53007 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC25A1P53007 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC25A1P53007 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC25A1P53007 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SLC25A1P53007 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.23■□□□□ 0.67
SLC25A1P53007 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC25A1P53007 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC25A1P53007 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.23■□□□□ 0.67
SLC25A1P53007 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SLC25A1P53007 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SLC25A1P53007 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC25A1P53007 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC25A1P53007 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SLC25A1P53007 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SLC25A1P53007 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms