Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GBX2P52951 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.24■□□□□ 0.67
GBX2P52951 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.24■□□□□ 0.67
GBX2P52951 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
GBX2P52951 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.24■□□□□ 0.67
GBX2P52951 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.24■□□□□ 0.67
GBX2P52951 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GBX2P52951 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GBX2P52951 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.24■□□□□ 0.67
GBX2P52951 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
GBX2P52951 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GBX2P52951 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GBX2P52951 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.23■□□□□ 0.67
GBX2P52951 AC004687.1-201ENST00000579003 1625 ntBASIC19.23■□□□□ 0.67
GBX2P52951 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.23■□□□□ 0.67
GBX2P52951 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GBX2P52951 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.23■□□□□ 0.67
GBX2P52951 YBX1P4-201ENST00000392794 808 ntBASIC19.23■□□□□ 0.67
GBX2P52951 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GBX2P52951 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GBX2P52951 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.23■□□□□ 0.67
GBX2P52951 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.23■□□□□ 0.67
GBX2P52951 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.23■□□□□ 0.67
GBX2P52951 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.23■□□□□ 0.67
GBX2P52951 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.23■□□□□ 0.67
GBX2P52951 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.23■□□□□ 0.67
GBX2P52951 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GBX2P52951 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GBX2P52951 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GBX2P52951 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GBX2P52951 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
GBX2P52951 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.22■□□□□ 0.67
GBX2P52951 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
GBX2P52951 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GBX2P52951 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GBX2P52951 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GBX2P52951 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GBX2P52951 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GBX2P52951 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GBX2P52951 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GBX2P52951 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.21■□□□□ 0.67
GBX2P52951 AC103724.3-201ENST00000564481 992 ntBASIC19.21■□□□□ 0.67
GBX2P52951 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
GBX2P52951 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GBX2P52951 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GBX2P52951 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GBX2P52951 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GBX2P52951 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GBX2P52951 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.21■□□□□ 0.67
GBX2P52951 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GBX2P52951 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GBX2P52951 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GBX2P52951 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GBX2P52951 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GBX2P52951 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.66
GBX2P52951 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.2■□□□□ 0.66
GBX2P52951 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
GBX2P52951 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GBX2P52951 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
GBX2P52951 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
GBX2P52951 AC103834.1-201ENST00000520383 144 ntBASIC19.2■□□□□ 0.66
GBX2P52951 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GBX2P52951 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GBX2P52951 AC005229.4-201ENST00000610085 2198 ntBASIC19.2■□□□□ 0.66
GBX2P52951 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.2■□□□□ 0.66
GBX2P52951 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GBX2P52951 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
GBX2P52951 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GBX2P52951 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GBX2P52951 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GBX2P52951 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GBX2P52951 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.2■□□□□ 0.66
GBX2P52951 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
GBX2P52951 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GBX2P52951 AC092667.1-201ENST00000434301 2586 ntBASIC19.19■□□□□ 0.66
GBX2P52951 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GBX2P52951 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.19■□□□□ 0.66
GBX2P52951 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GBX2P52951 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GBX2P52951 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.19■□□□□ 0.66
GBX2P52951 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GBX2P52951 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GBX2P52951 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
GBX2P52951 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GBX2P52951 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms