Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PDX1P52945 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDX1P52945 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.08■□□□□ 0.97
PDX1P52945 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDX1P52945 BX005040.4-201ENST00000637145 1518 ntBASIC21.08■□□□□ 0.96
PDX1P52945 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.08■□□□□ 0.96
PDX1P52945 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDX1P52945 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.07■□□□□ 0.96
PDX1P52945 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.07■□□□□ 0.96
PDX1P52945 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDX1P52945 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.07■□□□□ 0.96
PDX1P52945 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDX1P52945 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDX1P52945 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PDX1P52945 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
PDX1P52945 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.07■□□□□ 0.96
PDX1P52945 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDX1P52945 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDX1P52945 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PDX1P52945 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDX1P52945 AC016769.1-201ENST00000409132 1010 ntBASIC21.06■□□□□ 0.96
PDX1P52945 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.06■□□□□ 0.96
PDX1P52945 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.06■□□□□ 0.96
PDX1P52945 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDX1P52945 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDX1P52945 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDX1P52945 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDX1P52945 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDX1P52945 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDX1P52945 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDX1P52945 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDX1P52945 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDX1P52945 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.05■□□□□ 0.96
PDX1P52945 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.05■□□□□ 0.96
PDX1P52945 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.05■□□□□ 0.96
PDX1P52945 SMUG1P1-201ENST00000590640 811 ntBASIC21.05■□□□□ 0.96
PDX1P52945 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.05■□□□□ 0.96
PDX1P52945 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.05■□□□□ 0.96
PDX1P52945 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PDX1P52945 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDX1P52945 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.05■□□□□ 0.96
PDX1P52945 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDX1P52945 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDX1P52945 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDX1P52945 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDX1P52945 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDX1P52945 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDX1P52945 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.04■□□□□ 0.96
PDX1P52945 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.04■□□□□ 0.96
PDX1P52945 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDX1P52945 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDX1P52945 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDX1P52945 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.04■□□□□ 0.96
PDX1P52945 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDX1P52945 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.03■□□□□ 0.96
PDX1P52945 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.03■□□□□ 0.96
PDX1P52945 AC133561.1-201ENST00000568600 2415 ntBASIC21.03■□□□□ 0.96
PDX1P52945 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.03■□□□□ 0.96
PDX1P52945 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.03■□□□□ 0.96
PDX1P52945 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDX1P52945 C9orf163-202ENST00000624034 2573 ntBASIC21.03■□□□□ 0.96
PDX1P52945 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PDX1P52945 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDX1P52945 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.03■□□□□ 0.96
PDX1P52945 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDX1P52945 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDX1P52945 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PDX1P52945 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
PDX1P52945 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDX1P52945 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDX1P52945 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.02■□□□□ 0.96
PDX1P52945 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDX1P52945 AC068473.5-201ENST00000616428 2072 ntBASIC21.02■□□□□ 0.96
PDX1P52945 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDX1P52945 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDX1P52945 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.02■□□□□ 0.96
PDX1P52945 AC068587.7-201ENST00000641602 218 ntBASIC21.02■□□□□ 0.96
PDX1P52945 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.02■□□□□ 0.96
PDX1P52945 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.02■□□□□ 0.96
PDX1P52945 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDX1P52945 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.02■□□□□ 0.96
PDX1P52945 AL353803.4-201ENST00000565882 1934 ntBASIC21.02■□□□□ 0.95
PDX1P52945 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.02■□□□□ 0.95
PDX1P52945 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PDX1P52945 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDX1P52945 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDX1P52945 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDX1P52945 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDX1P52945 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PDX1P52945 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.01■□□□□ 0.95
PDX1P52945 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDX1P52945 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PDX1P52945 AC092068.2-201ENST00000590491 1708 ntBASIC21.01■□□□□ 0.95
PDX1P52945 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.01■□□□□ 0.95
PDX1P52945 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDX1P52945 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21■□□□□ 0.95
PDX1P52945 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDX1P52945 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21■□□□□ 0.95
PDX1P52945 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PDX1P52945 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms