Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR2JP52435 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.72■□□□□ 0.91
POLR2JP52435 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR2JP52435 Z92544.1-202ENST00000571933 1220 ntBASIC20.72■□□□□ 0.91
POLR2JP52435 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR2JP52435 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR2JP52435 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR2JP52435 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
POLR2JP52435 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.71■□□□□ 0.91
POLR2JP52435 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.71■□□□□ 0.91
POLR2JP52435 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2JP52435 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
POLR2JP52435 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2JP52435 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.71■□□□□ 0.91
POLR2JP52435 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2JP52435 AL499627.2-201ENST00000606283 725 ntBASIC20.71■□□□□ 0.91
POLR2JP52435 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.71■□□□□ 0.91
POLR2JP52435 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
POLR2JP52435 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
POLR2JP52435 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2JP52435 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
POLR2JP52435 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
POLR2JP52435 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2JP52435 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2JP52435 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2JP52435 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2JP52435 MIR4787-201ENST00000607364 84 ntBASIC20.7■□□□□ 0.9
POLR2JP52435 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.7■□□□□ 0.9
POLR2JP52435 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
POLR2JP52435 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR2JP52435 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2JP52435 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2JP52435 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2JP52435 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2JP52435 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2JP52435 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.69■□□□□ 0.9
POLR2JP52435 AC010997.5-201ENST00000609182 354 ntBASIC20.69■□□□□ 0.9
POLR2JP52435 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR2JP52435 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR2JP52435 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR2JP52435 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2JP52435 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.69■□□□□ 0.9
POLR2JP52435 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2JP52435 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2JP52435 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2JP52435 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR2JP52435 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
POLR2JP52435 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR2JP52435 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.68■□□□□ 0.9
POLR2JP52435 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.68■□□□□ 0.9
POLR2JP52435 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2JP52435 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2JP52435 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR2JP52435 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2JP52435 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2JP52435 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2JP52435 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR2JP52435 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
POLR2JP52435 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2JP52435 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2JP52435 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2JP52435 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR2JP52435 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2JP52435 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
POLR2JP52435 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2JP52435 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
POLR2JP52435 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
POLR2JP52435 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2JP52435 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2JP52435 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR2JP52435 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
POLR2JP52435 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR2JP52435 Z98882.1-201ENST00000622160 2253 ntBASIC20.66■□□□□ 0.9
POLR2JP52435 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.66■□□□□ 0.9
POLR2JP52435 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.66■□□□□ 0.9
POLR2JP52435 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2JP52435 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2JP52435 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2JP52435 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR2JP52435 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
POLR2JP52435 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
POLR2JP52435 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2JP52435 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2JP52435 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR2JP52435 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2JP52435 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2JP52435 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2JP52435 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2JP52435 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.65■□□□□ 0.9
POLR2JP52435 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.65■□□□□ 0.9
POLR2JP52435 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLR2JP52435 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
POLR2JP52435 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
POLR2JP52435 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
POLR2JP52435 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR2JP52435 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.64■□□□□ 0.89
POLR2JP52435 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
POLR2JP52435 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR2JP52435 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLR2JP52435 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms