Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NEK3P51956 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
NEK3P51956 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NEK3P51956 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NEK3P51956 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NEK3P51956 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NEK3P51956 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK3P51956 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
NEK3P51956 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK3P51956 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK3P51956 OR2I1P-207ENST00000453522 948 ntBASIC22.32■■□□□ 1.16
NEK3P51956 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
NEK3P51956 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.32■■□□□ 1.16
NEK3P51956 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK3P51956 AC139530.1-201ENST00000575312 1977 ntBASIC22.32■■□□□ 1.16
NEK3P51956 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK3P51956 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
NEK3P51956 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NEK3P51956 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NEK3P51956 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NEK3P51956 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.31■■□□□ 1.16
NEK3P51956 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NEK3P51956 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.31■■□□□ 1.16
NEK3P51956 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
NEK3P51956 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.31■■□□□ 1.16
NEK3P51956 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NEK3P51956 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NEK3P51956 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.31■■□□□ 1.16
NEK3P51956 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NEK3P51956 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK3P51956 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK3P51956 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.3■■□□□ 1.16
NEK3P51956 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
NEK3P51956 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.3■■□□□ 1.16
NEK3P51956 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK3P51956 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.3■■□□□ 1.16
NEK3P51956 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK3P51956 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK3P51956 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NEK3P51956 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK3P51956 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.3■■□□□ 1.16
NEK3P51956 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.29■■□□□ 1.16
NEK3P51956 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
NEK3P51956 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.29■■□□□ 1.16
NEK3P51956 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NEK3P51956 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
NEK3P51956 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
NEK3P51956 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NEK3P51956 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NEK3P51956 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NEK3P51956 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.29■■□□□ 1.16
NEK3P51956 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.29■■□□□ 1.16
NEK3P51956 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.29■■□□□ 1.16
NEK3P51956 RARRES2P6-201ENST00000567333 442 ntBASIC22.29■■□□□ 1.16
NEK3P51956 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
NEK3P51956 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
NEK3P51956 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.29■■□□□ 1.16
NEK3P51956 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NEK3P51956 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.29■■□□□ 1.16
NEK3P51956 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NEK3P51956 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NEK3P51956 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
NEK3P51956 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NEK3P51956 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.29■■□□□ 1.16
NEK3P51956 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NEK3P51956 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NEK3P51956 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NEK3P51956 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.28■■□□□ 1.16
NEK3P51956 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NEK3P51956 IRS3P-201ENST00000223076 1006 ntBASIC22.28■■□□□ 1.16
NEK3P51956 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.28■■□□□ 1.16
NEK3P51956 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
NEK3P51956 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.27■■□□□ 1.16
NEK3P51956 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
NEK3P51956 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NEK3P51956 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
NEK3P51956 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.27■■□□□ 1.16
NEK3P51956 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NEK3P51956 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
NEK3P51956 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.27■■□□□ 1.16
NEK3P51956 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NEK3P51956 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NEK3P51956 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
NEK3P51956 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
NEK3P51956 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.26■■□□□ 1.15
NEK3P51956 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NEK3P51956 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.26■■□□□ 1.15
NEK3P51956 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.26■■□□□ 1.15
NEK3P51956 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NEK3P51956 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.26■■□□□ 1.15
NEK3P51956 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
NEK3P51956 AL353803.4-201ENST00000565882 1934 ntBASIC22.26■■□□□ 1.15
NEK3P51956 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.26■■□□□ 1.15
NEK3P51956 AC010525.1-201ENST00000585559 441 ntBASIC22.26■■□□□ 1.15
NEK3P51956 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
NEK3P51956 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
NEK3P51956 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NEK3P51956 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.26■■□□□ 1.15
NEK3P51956 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NEK3P51956 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms