Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC004448.1-201ENST00000458332 883 ntBASIC18.8■□□□□ 0.6
GDNFP39905 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.8■□□□□ 0.6
GDNFP39905 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GDNFP39905 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDNFP39905 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDNFP39905 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDNFP39905 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GDNFP39905 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDNFP39905 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GDNFP39905 AC021242.3-201ENST00000607598 1377 ntBASIC18.8■□□□□ 0.6
GDNFP39905 AC244015.2-201ENST00000616358 1861 ntBASIC18.8■□□□□ 0.6
GDNFP39905 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.8■□□□□ 0.6
GDNFP39905 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GDNFP39905 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GDNFP39905 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDNFP39905 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
GDNFP39905 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDNFP39905 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDNFP39905 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDNFP39905 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
GDNFP39905 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GDNFP39905 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.79■□□□□ 0.6
GDNFP39905 SNX5-217ENST00000606557 1087 ntBASIC18.79■□□□□ 0.6
GDNFP39905 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.79■□□□□ 0.6
GDNFP39905 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
GDNFP39905 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDNFP39905 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.79■□□□□ 0.6
GDNFP39905 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDNFP39905 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDNFP39905 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDNFP39905 BX664725.1-201ENST00000438252 379 ntBASIC18.78■□□□□ 0.6
GDNFP39905 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GDNFP39905 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDNFP39905 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GDNFP39905 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.78■□□□□ 0.6
GDNFP39905 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDNFP39905 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDNFP39905 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GDNFP39905 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GDNFP39905 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GDNFP39905 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.77■□□□□ 0.6
GDNFP39905 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.77■□□□□ 0.6
GDNFP39905 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.77■□□□□ 0.6
GDNFP39905 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GDNFP39905 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.77■□□□□ 0.6
GDNFP39905 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GDNFP39905 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
GDNFP39905 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GDNFP39905 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GDNFP39905 AL157384.1-201ENST00000445995 2473 ntBASIC18.77■□□□□ 0.59
GDNFP39905 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
GDNFP39905 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.77■□□□□ 0.59
GDNFP39905 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
GDNFP39905 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GDNFP39905 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.76■□□□□ 0.59
GDNFP39905 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GDNFP39905 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.76■□□□□ 0.59
GDNFP39905 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.76■□□□□ 0.59
GDNFP39905 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDNFP39905 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDNFP39905 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
GDNFP39905 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GDNFP39905 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
GDNFP39905 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDNFP39905 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
GDNFP39905 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GDNFP39905 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
GDNFP39905 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GDNFP39905 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
GDNFP39905 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
GDNFP39905 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDNFP39905 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GDNFP39905 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GDNFP39905 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
GDNFP39905 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDNFP39905 AC239859.2-201ENST00000444165 318 ntBASIC18.75■□□□□ 0.59
GDNFP39905 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.75■□□□□ 0.59
GDNFP39905 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GDNFP39905 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
GDNFP39905 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDNFP39905 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDNFP39905 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GDNFP39905 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.74■□□□□ 0.59
GDNFP39905 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
GDNFP39905 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.74■□□□□ 0.59
GDNFP39905 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GDNFP39905 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.74■□□□□ 0.59
GDNFP39905 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.74■□□□□ 0.59
GDNFP39905 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GDNFP39905 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.74■□□□□ 0.59
GDNFP39905 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GDNFP39905 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.74■□□□□ 0.59
GDNFP39905 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
GDNFP39905 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GDNFP39905 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.73■□□□□ 0.59
GDNFP39905 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GDNFP39905 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
GDNFP39905 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.73■□□□□ 0.59
GDNFP39905 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.73■□□□□ 0.59
GDNFP39905 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms